G42816


Basic Information

Item Value
gene id G42816
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 24410842 ~ 24411044 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU53377
AAAATACACaccttaagaaaaacaaatgcgaAGGGAGTCTTGAAAGGAGGGCTAAGACTTTCCCTTTCCAAACGTGACAAGTCAATGTTTGAATGTTAAATGCAGATCGCAGTTGTTTGCTTACTTTTGTCCTGGGTGTGCACTGCGAGACAAGGTGTCACTGGCTGTGCCGTCCCGGGGCTTCAGTGTTGGCTCAGGTTCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU53377 True 203 lncRNA 0.47 1 24410842 24411044

Neighbor

gene id symbol gene type direction distance location
AMCG00013196 slc39a11,LOC107693650 coding upstream 190123 24216510 ~ 24220719 (+)
AMCG00013197 NA coding upstream 218360 24124906 ~ 24192482 (+)
AMCG00013195 NA coding upstream 294584 24022831 ~ 24116258 (+)
AMCG00013187 NA coding upstream 426417 23973082 ~ 23984425 (+)
AMCG00013188 NA coding upstream 448885 23952046 ~ 23961957 (+)
AMCG00013200 NA coding downstream 363754 24774798 ~ 24777606 (+)
AMCG00013203 NA coding downstream 377581 24788625 ~ 24793416 (+)
AMCG00013202 NA coding downstream 387283 24798327 ~ 24799733 (+)
AMCG00013209 NA coding downstream 543927 24954971 ~ 24957583 (+)
AMCG00013215 NA coding downstream 562673 24973717 ~ 24991262 (+)
G42780 NA non-coding upstream 402992 24007353 ~ 24007850 (+)
G42779 sstr5,LOC104918336,LOC102219310,LOC102291375 non-coding upstream 406955 23997794 ~ 24003887 (+)
G42705 NA non-coding upstream 579442 23784408 ~ 23831400 (+)
G42619 NA non-coding upstream 850182 23554672 ~ 23560660 (+)
G42554 NA non-coding upstream 1547860 22861815 ~ 22862982 (+)
G42845 NA non-coding downstream 334479 24745523 ~ 24745754 (+)
G42847 rnf213,LOC107701915,LOC107556605 non-coding downstream 338648 24749692 ~ 24750256 (+)
G42848 NA non-coding downstream 339264 24750308 ~ 24750565 (+)
G42849 NA non-coding downstream 339763 24750807 ~ 24751467 (+)
G42850 NA non-coding downstream 340763 24751807 ~ 24752082 (+)
AMCG00013198 NA other upstream 78988 24241269 ~ 24331854 (+)
AMCG00013147 NA other upstream 2150026 22248497 ~ 22260816 (+)
G42453 NA other upstream 2165052 22242429 ~ 22245790 (+)
G42344 LOC108412647 other upstream 2924034 21426660 ~ 21486808 (+)
AMCG00013118 LOC106594791 other upstream 2939282 21286031 ~ 21471560 (+)
G42846 NA other downstream 336448 24747492 ~ 24749395 (+)
G42858 NA other downstream 357380 24768424 ~ 24770148 (+)
AMCG00013236 NA other downstream 1102309 25513353 ~ 25521681 (+)
AMCG00013248 NA other downstream 1382361 25793405 ~ 25798013 (+)
AMCG00013251 NA other downstream 1742192 26153236 ~ 26161139 (+)

Expression


Co-expression Network