Gene
RNA
| Item | Value |
|---|---|
| gene id | G42845 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 24745523 ~ 24745754 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU53406 | True | 232 | lncRNA | 0.34 | 1 | 24745523 | 24745754 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00013196 | slc39a11,LOC107693650 | coding | upstream | 524804 | 24216510 ~ 24220719 (+) |
| AMCG00013197 | NA | coding | upstream | 553041 | 24124906 ~ 24192482 (+) |
| AMCG00013195 | NA | coding | upstream | 629265 | 24022831 ~ 24116258 (+) |
| AMCG00013187 | NA | coding | upstream | 761098 | 23973082 ~ 23984425 (+) |
| AMCG00013188 | NA | coding | upstream | 783566 | 23952046 ~ 23961957 (+) |
| AMCG00013200 | NA | coding | downstream | 29044 | 24774798 ~ 24777606 (+) |
| AMCG00013203 | NA | coding | downstream | 42871 | 24788625 ~ 24793416 (+) |
| AMCG00013202 | NA | coding | downstream | 52573 | 24798327 ~ 24799733 (+) |
| AMCG00013209 | NA | coding | downstream | 209217 | 24954971 ~ 24957583 (+) |
| AMCG00013215 | NA | coding | downstream | 227963 | 24973717 ~ 24991262 (+) |
| G42816 | NA | non-coding | upstream | 334479 | 24410842 ~ 24411044 (+) |
| G42780 | NA | non-coding | upstream | 737673 | 24007353 ~ 24007850 (+) |
| G42779 | sstr5,LOC104918336,LOC102219310,LOC102291375 | non-coding | upstream | 741636 | 23997794 ~ 24003887 (+) |
| G42705 | NA | non-coding | upstream | 914123 | 23784408 ~ 23831400 (+) |
| G42619 | NA | non-coding | upstream | 1184863 | 23554672 ~ 23560660 (+) |
| G42847 | rnf213,LOC107701915,LOC107556605 | non-coding | downstream | 3938 | 24749692 ~ 24750256 (+) |
| G42848 | NA | non-coding | downstream | 4554 | 24750308 ~ 24750565 (+) |
| G42849 | NA | non-coding | downstream | 5053 | 24750807 ~ 24751467 (+) |
| G42850 | NA | non-coding | downstream | 6053 | 24751807 ~ 24752082 (+) |
| G42855 | NA | non-coding | downstream | 21502 | 24767256 ~ 24767458 (+) |
| AMCG00013198 | NA | other | upstream | 413669 | 24241269 ~ 24331854 (+) |
| AMCG00013147 | NA | other | upstream | 2484707 | 22248497 ~ 22260816 (+) |
| G42453 | NA | other | upstream | 2499733 | 22242429 ~ 22245790 (+) |
| G42344 | LOC108412647 | other | upstream | 3258715 | 21426660 ~ 21486808 (+) |
| AMCG00013126 | myhb,LOC108443910 | other | upstream | 3324207 | 21370843 ~ 21421316 (+) |
| G42846 | NA | other | downstream | 1738 | 24747492 ~ 24749395 (+) |
| G42858 | NA | other | downstream | 22670 | 24768424 ~ 24770148 (+) |
| AMCG00013236 | NA | other | downstream | 767599 | 25513353 ~ 25521681 (+) |
| AMCG00013248 | NA | other | downstream | 1047651 | 25793405 ~ 25798013 (+) |
| AMCG00013251 | NA | other | downstream | 1407482 | 26153236 ~ 26161139 (+) |
