G43042



Basic Information


Item Value
gene id G43042
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 25366266 ~ 25424074 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU53680
tgctctttattataaattattgaaatgttttataaatataaatatgtgcaaagtttctttttttgtttttgttattgttttttgtttgtttcagatctTCAAGCTTGTATCACCAGTCATCAGGCTGGACATTAAGGTGGAATCTTTATAAAAGACACAcgcacaacaaaaaaaaaaaaagTTTTTGC

Function


GO:

id name namespace
GO:0030162 regulation of proteolysis biological_process
GO:0052547 regulation of peptidase activity biological_process
GO:0051336 regulation of hydrolase activity biological_process

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU53680 True 188 lncRNA 0.27 2 25366266 25424074

Neighbor


gene id symbol gene type direction distance location
AMCG00013235 NA coding downstream 7765 25357680 ~ 25358501 (-)
AMCG00013224 NA coding downstream 254831 25099351 ~ 25111435 (-)
AMCG00013217 NA coding downstream 334493 25030591 ~ 25031773 (-)
AMCG00013211 notum1a,notum,LOC107732149 coding downstream 422820 24927137 ~ 24943446 (-)
AMCG00013212 NA coding downstream 445060 24920301 ~ 24921206 (-)
AMCG00013240 NA coding upstream 69303 25493377 ~ 25504516 (-)
AMCG00013238 NA coding upstream 84123 25508197 ~ 25512871 (-)
AMCG00013239 NA coding upstream 102568 25526642 ~ 25537475 (-)
AMCG00013242 NA coding upstream 261395 25685469 ~ 25685725 (-)
AMCG00013247 NA coding upstream 373146 25797220 ~ 25803654 (-)
G43040 NA non-coding downstream 14528 25289470 ~ 25351738 (-)
G43011 NA non-coding downstream 226523 25136776 ~ 25139743 (-)
G42800 NA non-coding downstream 1143528 24220651 ~ 24222738 (-)
G42760 NA non-coding downstream 1449242 23912791 ~ 23917024 (-)
G42743 NA non-coding downstream 1464346 23901443 ~ 23901920 (-)
G43072 NA non-coding upstream 94737 25518811 ~ 25519993 (-)
G43100 NA non-coding upstream 163840 25587914 ~ 25588261 (-)
G43165 NA non-coding upstream 695623 26119697 ~ 26119919 (-)
G43171 NA non-coding upstream 724342 26148416 ~ 26148633 (-)
G43184 NA non-coding upstream 830922 26254996 ~ 26257823 (-)
AMCG00013223 tk1,kith,LOC102792372 other downstream 199493 25162157 ~ 25166773 (-)
G43001 NA other downstream 288022 25075393 ~ 25078244 (-)
AMCG00013216 NA other downstream 337262 25025738 ~ 25029004 (-)
AMCG00013204 mafg,LOC108241257,LOC106533856 other downstream 463838 24879641 ~ 24902428 (-)
G42749 NA other downstream 1518789 23844083 ~ 23847477 (-)
G43070 NA other upstream 92006 25516080 ~ 25516963 (-)
AMCG00013241 NA other upstream 164413 25588487 ~ 25628252 (-)
AMCG00013245 NA other upstream 352300 25776374 ~ 25777723 (-)
AMCG00013246 NA other upstream 362069 25786143 ~ 25791759 (-)
AMCG00013258 NA other upstream 1055537 26479611 ~ 26484414 (-)

Expression



Co-expression Network