G43063


Basic Information

Item Value
gene id G43063
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 25512208 ~ 25512901 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU53704
ATGAACCCTGCCTTGGCCATGTTTTCCGGAGTGCAAACGCAGCCCTCCTGAAAAGGCCACCCCGAGTAGGTCTCCAGACGGCTTtcgtaaaaatacattttcgtGTGCTCTTCATTAGCTACTTCCATTGTGGAAAAcgtatttaaaaacacaatttcactTGTTTCCGCTTTTGTCTGATGCTCTTCTACAGCCTGTTTACTCCACCCGGCCTTTTACTGGTTTGAATTTCCAG

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle
ko04111 Cell cycle - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
TU53704 True 235 lncRNA 0.46 2 25512208 25512901

Neighbor

gene id symbol gene type direction distance location
AMCG00013232 NA coding upstream 26588 25479858 ~ 25485620 (+)
AMCG00013234 socs3 coding upstream 88224 25421661 ~ 25423984 (+)
AMCG00013229 NA coding upstream 127736 25375516 ~ 25384472 (+)
AMCG00013231 NA coding upstream 145662 25357317 ~ 25366546 (+)
AMCG00013228 LOC108274176,LOC108426518,LOC103022618 coding upstream 160470 25331132 ~ 25351738 (+)
AMCG00013237 NA coding downstream 38694 25551595 ~ 25554794 (+)
AMCG00013243 slc38a10,LOC107749860 coding downstream 233764 25746665 ~ 25775438 (+)
AMCG00013244 LOC105892758 coding downstream 265011 25777912 ~ 25784972 (+)
AMCG00013252 ttyh2,LOC106589617,LOC106610147 coding downstream 747139 26260040 ~ 26312137 (+)
AMCG00013254 dnai2,LOC106610195 coding downstream 801385 26314286 ~ 26318743 (+)
G43062 NA non-coding upstream 861 25508191 ~ 25511347 (+)
G42950 NA non-coding upstream 136109 25089170 ~ 25376099 (+)
G42925 NA non-coding upstream 495842 24991455 ~ 25016366 (+)
G42922 NA non-coding upstream 585463 24924791 ~ 24926745 (+)
G42906 NA non-coding upstream 630150 24879764 ~ 24882058 (+)
G43064 NA non-coding downstream 9577 25522478 ~ 25524992 (+)
G43078 NA non-coding downstream 75578 25588479 ~ 25592334 (+)
G43079 bahcc1,LOC107722173 non-coding downstream 81470 25594371 ~ 25594607 (+)
G43080 NA non-coding downstream 81796 25594697 ~ 25595941 (+)
G43081 NA non-coding downstream 87912 25600813 ~ 25601177 (+)
G42858 NA other upstream 742060 24768424 ~ 24770148 (+)
G42846 NA other upstream 762813 24747492 ~ 24749395 (+)
AMCG00013198 NA other upstream 1180354 24241269 ~ 24331854 (+)
AMCG00013147 NA other upstream 3251392 22248497 ~ 22260816 (+)
G42453 NA other upstream 3266418 22242429 ~ 22245790 (+)
AMCG00013236 NA other downstream 452 25513353 ~ 25521681 (+)
AMCG00013248 NA other downstream 280504 25793405 ~ 25798013 (+)
AMCG00013251 NA other downstream 640335 26153236 ~ 26161139 (+)
AMCG00013255 NA other downstream 742073 26254974 ~ 26258982 (+)
AMCG00013257 LOC106612075,LOC107560953 other downstream 854894 26367795 ~ 26396705 (+)

Expression


Co-expression Network