G43084


Basic Information

Item Value
gene id G43084
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 25619610 ~ 25620005 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU53725
CAGGCTCCAGGGATTGTGGGTAGTCCTGCGGTGGCTGCCCTTCCCCTCTCTTATCCTGCGACTCCGCCCCCTTGGAGGCGTGGGGAGGGGCCGGGCTCAGAGCGGGGGAGCGGGGGGCGGCAGCCGGGCTGGGGGCGGGGCATGGGGTGCAGGGAGTGCTCTTGGGGTGCGGCCGTAGGGACGGGGAGCGACAGCAGGGAGACAGCCTGGCGCCACAGGCCCCTGGAGAAGGAACACTTTTGTTGGAAGGGGCAAAGGAGAAAGGCTTGGCAGTCTTAGGGGTCCTGGGCTGGGACAGCAAGTCATCCAGCTCCATGTGGGGGTCCTCTGGCTTCCGCTGTGCCTGCAGATACAAAATAATGGGTATAAAATGTTACTTGGAGAACTGCACTGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU53725 True 396 lncRNA 0.64 1 25619610 25620005

Neighbor

gene id symbol gene type direction distance location
AMCG00013237 NA coding upstream 64816 25551595 ~ 25554794 (+)
AMCG00013232 NA coding upstream 133990 25479858 ~ 25485620 (+)
AMCG00013234 socs3 coding upstream 195626 25421661 ~ 25423984 (+)
AMCG00013229 NA coding upstream 235138 25375516 ~ 25384472 (+)
AMCG00013231 NA coding upstream 253064 25357317 ~ 25366546 (+)
AMCG00013243 slc38a10,LOC107749860 coding downstream 126660 25746665 ~ 25775438 (+)
AMCG00013244 LOC105892758 coding downstream 157907 25777912 ~ 25784972 (+)
AMCG00013252 ttyh2,LOC106589617,LOC106610147 coding downstream 640035 26260040 ~ 26312137 (+)
AMCG00013254 dnai2,LOC106610195 coding downstream 694281 26314286 ~ 26318743 (+)
AMCG00013253 kif19,LOC107560952 coding downstream 701761 26321766 ~ 26363091 (+)
G43082 NA non-coding upstream 15372 25603998 ~ 25604238 (+)
G43081 NA non-coding upstream 18433 25600813 ~ 25601177 (+)
G43080 NA non-coding upstream 23669 25594697 ~ 25595941 (+)
G43079 bahcc1,LOC107722173 non-coding upstream 25003 25594371 ~ 25594607 (+)
G43078 NA non-coding upstream 27276 25588479 ~ 25592334 (+)
G43085 NA non-coding downstream 932 25620937 ~ 25621239 (+)
G43138 NA non-coding downstream 187414 25807419 ~ 25844594 (+)
G43303 NA non-coding downstream 1164948 26784953 ~ 26785561 (+)
G43326 NA non-coding downstream 1252816 26872821 ~ 26930253 (+)
G43402 NA non-coding downstream 1390367 27010372 ~ 27010651 (+)
AMCG00013236 NA other upstream 97929 25513353 ~ 25521681 (+)
G42858 NA other upstream 849462 24768424 ~ 24770148 (+)
G42846 NA other upstream 870215 24747492 ~ 24749395 (+)
AMCG00013198 NA other upstream 1287756 24241269 ~ 24331854 (+)
AMCG00013147 NA other upstream 3358794 22248497 ~ 22260816 (+)
AMCG00013248 NA other downstream 173400 25793405 ~ 25798013 (+)
AMCG00013251 NA other downstream 533231 26153236 ~ 26161139 (+)
AMCG00013255 NA other downstream 634969 26254974 ~ 26258982 (+)
AMCG00013257 LOC106612075,LOC107560953 other downstream 747790 26367795 ~ 26396705 (+)
AMCG00013265 LOC107672452,LOC107711237,LOC107567237,LOC107670476 other downstream 807941 26427946 ~ 26478544 (+)

Expression


Co-expression Network