G43263


Basic Information

Item Value
gene id G43263
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 26524826 ~ 26540049 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU53939
AAGCGTTTTTGCTCGAGTTCCTGGAAGTGTGGTGGGACAGGGCAGAGCAAAGAAATGTTTGAGGAGCCAAAGGGCATGGAGGAAGAGGACAGTCCAAGCCTGGGGCTTGTCTTGGGGAATGCCCAGTCAGAAGAGGTGGGGGATGAGATGGACCCAGTGGTGGTGTGGGCCCCAAGTGGACGGAGGCTGGTTTCGGGGCTGTTAGCTCTAAACTTAGTGCTTTTGGGGGCAGCCTTGGTGACAGGAGAGGCATTTAACCCCAATGCCCTAAAGCACCAGGAGCCCCAGGTGTTCATTCTGCTGCTGATGGGACTCAGTCTTATATGGATTTTGTGGTACCTCCTTTGGGCTCGGAGACAGCCGGGCATTTCTCCACACACAGATCACCACGCTGGCAGCGTCTGCATGACAGTGGTCCTCCTGGTGTTCACAGCCTGCAGTCTTCTGCTCCAGGTGTTCAAGATGGGCTATTACGTTATTCTGATGGAATGTAAACCAACTGCTAAAGTACTCTTGCCCTTCATTGAATCCCCCTTTCTCGGACTGCAGACGTACCTGTTATGGGCTCACTCCAAAGACTGCATCCACCGACACAAGATCCTCACCAGGGCTGGCCTGGTGCTGGTTCTCACTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU53939 True 635 TUCP 0.54 4 26524826 26540049

Neighbor

gene id symbol gene type direction distance location
AMCG00013266 NA coding upstream 520 26516304 ~ 26524306 (+)
AMCG00013256 chmp6,LOC108429718,LOC107690936,LOC106589902 coding upstream 120258 26398678 ~ 26404568 (+)
AMCG00013253 kif19,LOC107560952 coding upstream 161735 26321766 ~ 26363091 (+)
AMCG00013254 dnai2,LOC106610195 coding upstream 206083 26314286 ~ 26318743 (+)
AMCG00013252 ttyh2,LOC106589617,LOC106610147 coding upstream 212689 26260040 ~ 26312137 (+)
AMCG00013270 NA coding downstream 17719 26557768 ~ 26564168 (+)
AMCG00013267 exoc7 coding downstream 48706 26588755 ~ 26608863 (+)
AMCG00013274 NA coding downstream 185185 26725234 ~ 26726439 (+)
AMCG00013273 kcnj2,LOC104928150,LOC107597836,LOC107704237 coding downstream 197505 26737554 ~ 26738834 (+)
AMCG00013275 NA coding downstream 314375 26854424 ~ 26856636 (+)
G43138 NA non-coding upstream 680232 25807419 ~ 25844594 (+)
G43085 NA non-coding upstream 903587 25620937 ~ 25621239 (+)
G43084 NA non-coding upstream 904821 25619610 ~ 25620005 (+)
G43082 NA non-coding upstream 920588 25603998 ~ 25604238 (+)
G43081 NA non-coding upstream 923649 25600813 ~ 25601177 (+)
G43303 NA non-coding downstream 244904 26784953 ~ 26785561 (+)
G43326 NA non-coding downstream 332772 26872821 ~ 26930253 (+)
G43402 NA non-coding downstream 470323 27010372 ~ 27010651 (+)
G43438 NA non-coding downstream 729979 27270028 ~ 27417787 (+)
G43673 NA non-coding downstream 1849640 28389689 ~ 28389960 (+)
AMCG00013265 LOC107672452,LOC107711237,LOC107567237,LOC107670476 other upstream 46282 26427946 ~ 26478544 (+)
AMCG00013257 LOC106612075,LOC107560953 other upstream 128121 26367795 ~ 26396705 (+)
AMCG00013255 NA other upstream 265844 26254974 ~ 26258982 (+)
AMCG00013251 NA other upstream 363687 26153236 ~ 26161139 (+)
AMCG00013248 NA other upstream 726813 25793405 ~ 25798013 (+)
G43309 NA other downstream 268115 26808164 ~ 26811615 (+)
AMCG00013281 NA other downstream 352547 26892596 ~ 26923139 (+)
AMCG00013286 pde6g,LOC102221623,LOC103367935,LOC102781464 other downstream 357460 26897509 ~ 26904963 (+)
G43434 NA other downstream 618253 27158302 ~ 27158721 (+)
AMCG00013298 NA other downstream 845616 27385665 ~ 27415286 (+)

Expression


Co-expression Network