G43303


Basic Information

Item Value
gene id G43303
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 26784953 ~ 26785561 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU53997
GCAGAATATACAGGGACAGGTGGATATCACCATCATTTCTGTGTTGgagtacataagaacataagaaagtttacaaacgagagggggcctttgacccatcgtgctcgtttggtgttcattaatatctaagtgatccaaggatcctatccagtctatttttaaatgttcccaaactttcagcttcaaccacatcgctgggtagtttattccagattgtgacgactctctgtgtaaagaagtgtctcctgttttccgttttgaatgccttgaagcccaatttccatttgtgtccccgggtgcgtgtgtccctgctgatctggaaaagctcctctggtttgatgtggtcgatgcctttcatgattttgaagacttggatcaagttcccacatagtctcctctgttccagggtgaaaaggttcagttccctcagtctctctgagtaggactttcccttcagacctggaataagtctgattgctctcctctgaattgcctctaaagcagcgatatccttcttgaagtgtggttcccagaactgtacacagtatccagatgaggagTAAGCAGGAATAAACCCTTCAGTATTCATGAggcattttaaaagctgtt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU53997 True 609 lncRNA 0.44 1 26784953 26785561

Neighbor

gene id symbol gene type direction distance location
AMCG00013273 kcnj2,LOC104928150,LOC107597836,LOC107704237 coding upstream 46119 26737554 ~ 26738834 (+)
AMCG00013274 NA coding upstream 58514 26725234 ~ 26726439 (+)
AMCG00013267 exoc7 coding upstream 176090 26588755 ~ 26608863 (+)
AMCG00013270 NA coding upstream 220785 26557768 ~ 26564168 (+)
AMCG00013269 NA coding upstream 245099 26538899 ~ 26539854 (+)
AMCG00013275 NA coding downstream 68863 26854424 ~ 26856636 (+)
AMCG00013290 NA coding downstream 77197 26862758 ~ 26870903 (+)
AMCG00013285 nploc4 coding downstream 123230 26908791 ~ 26920057 (+)
AMCG00013282 NA coding downstream 139005 26924566 ~ 26928580 (+)
AMCG00013284 NA coding downstream 143698 26929259 ~ 26963188 (+)
G43138 NA non-coding upstream 940359 25807419 ~ 25844594 (+)
G43085 NA non-coding upstream 1163714 25620937 ~ 25621239 (+)
G43084 NA non-coding upstream 1164948 25619610 ~ 25620005 (+)
G43082 NA non-coding upstream 1180715 25603998 ~ 25604238 (+)
G43081 NA non-coding upstream 1183776 25600813 ~ 25601177 (+)
G43326 NA non-coding downstream 87260 26872821 ~ 26930253 (+)
G43402 NA non-coding downstream 224811 27010372 ~ 27010651 (+)
G43438 NA non-coding downstream 484467 27270028 ~ 27417787 (+)
G43673 NA non-coding downstream 1604128 28389689 ~ 28389960 (+)
G43712 NA non-coding downstream 1952562 28738123 ~ 28738753 (+)
G43263 NA other upstream 244904 26524826 ~ 26540049 (+)
AMCG00013265 LOC107672452,LOC107711237,LOC107567237,LOC107670476 other upstream 306409 26427946 ~ 26478544 (+)
AMCG00013257 LOC106612075,LOC107560953 other upstream 388248 26367795 ~ 26396705 (+)
AMCG00013255 NA other upstream 525971 26254974 ~ 26258982 (+)
AMCG00013251 NA other upstream 623814 26153236 ~ 26161139 (+)
G43309 NA other downstream 22603 26808164 ~ 26811615 (+)
AMCG00013281 NA other downstream 107035 26892596 ~ 26923139 (+)
AMCG00013286 pde6g,LOC102221623,LOC103367935,LOC102781464 other downstream 111948 26897509 ~ 26904963 (+)
G43434 NA other downstream 372741 27158302 ~ 27158721 (+)
AMCG00013298 NA other downstream 600104 27385665 ~ 27415286 (+)

Expression


Co-expression Network