G43309


Basic Information

Item Value
gene id G43309
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 26808164 ~ 26811615 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU54005
ACAATTGCACACAATCAGATTGGGCAATCTAAAATATTCATAGAAATTTATTCACCTCTAAATGAACAGTCATTAGTCTTTGCAAATGCCTTACAGTGATGTGTAGATATGCTGAGAACTTTTATCCTGGGGTAGACTTGACACCACAGTGCCCCCTCTGTGGACTTCACACGTGCAGAGGCCATGATCTCAGGTGATTTTCGGTCAGAGTTGCTAATGGATCATGCTAAGGGATAATGCAGGGCCCCCACACCCTGCTTCTCTGCATGGGCCTCAATCTCACGACAGCACAGTGCTCTTCAACGTTGCATGCCAAACGAAAGCTGGGTCAGACGAGAGCAGACCCATGATACGCAAATACGGTTCAAATACTCATGGCCTCGAAACGCAGCTATATTTTACGTATATGGAGAACAAATTTCAAATACTTTAAACCGTAAAGGACACGTATACTTAGGTTTAATAGGACATGGACAGAATTACACCctttttagaaaaagaaaattaaaacaaacccaaaaaaatGCAGTAATAAAAGTACATAGGCCTTACGGCACAAACTACACATGGaatattctaaaatatttaCTTCCAGTTTAGAAAccagcagttttattttcactgaagacaacatttaaatgaatcaaaagaaaagaaaaacaggcccAGCTAAATAACCCTCAGTGAATATATCCCTATCACTTTAAATACACCAGACAATTAAGAAGTGGCCCCTCATTCCTGTAAGGATGACCTATGTATTCATTGCTCATTTATAACAACTAAAGATTAGTAAAGGGGAATGAATGGGACCTtagctttatttattgttctgcAGTGTCTCATTTCAACAggtatatcaatatataaaacacGTGTGCAAATACCATGGGACAAAATTAGATTCATAAAAAGgaacacatacataataacctggtttatttaattatttttgtgattttcataGAATAGGATCTTCATATTGGGACACTAGATTGTGTGGATTTATCGTCCAATTATACCCATTACTTGTCGTATCTCTACACCGTTCAAATcattgtgtttgcttatttggtGCAAAAATGATAGTAAAGAGATTTAATCTGAGCGAGGGTCTGGTTTTTATTGCTTGGTAgcttttgaaaggaaaagagatttaaaaattCAGTATtcccatacatacatacatacatacataaatacatacttaatGTAAATAGAACCCAACTCCACAACTAAAAATACACCATTTCATTAATAGCATTTTTAGTGACATAATTAAAATCCTCCTGAGCACACTCTTAGCAATGCTTAAAATCCAGGCCTTTGGTTAAAGTGATCTATCATAACCCACGAATAGTTAAGGTTGCTCCATAGTACAGTACAAATGAAAAGAATATAGTGACTTTTCTGCATAATTTCAGTGTGATAAACCTGTTGTCATGTCATATGTAGCTTTTGTATGAAAAGAGAAATCGTACACCTCCTAATATAATACACCATACATTTTCAAGTTAGGCACCTCTTAAACCTTGAAAAGTAAACATTGTTTCACATTCACTTGATAAACTCCATTGCAAATTGGACTTTGGTACAAAGATGTACTGGATGCAAAATCACAAAGACGAGCAGAATAGACAACACTGCCCTCTTCCTACGAACAAGCAGCTCCCAAACCGAAAGCTAAATTCTACCACAGCGCTCTTGTTTTCTAACAGCCTGGGTTATTAAATAACTAGCAcaaaaaaatgataaacttATAGTGATTTCCTGGCAAGACTGTGTCCAGCCAGGGGTCTGTGGTGATTGTATCAGCTAGGCACTGGGGAGAGAAGACAGAAATGGGGGGTGGAGGAATCCTGTACTTTAGACTCAGTGGAGGCAAACTTGCAATCAATTCAAtctcatgcattttgtttttcttaattatgtACTTTCTAATTTTGCATGCAGTAATGAAGGTTACGCATAGAAACACCGAGAACACATGGAACATTTGCAGCCTTAGAAAAATGGTGAGGGCCAAAGATGGTTGGTTTGATGAAGGGGCTTCATCCTggcacacaaatacacagccaGCATTACACCCTTTTCCACTCAGTCTTCAAGTATTTAATGAGCCAAATGAGGGACTTCTTGTTTGCATACAAACAATAATCAAGCTCAAGTCAACAGCACAGCACGTGGaaagagaacaaataaataaaatcagtgtatgCATTTCCCGCAAGGTGAATGTAAATATtcgcagaaagagagagaggtttccGCTTTCACAGGCACAATCTATACTTGTGTGAAATGTGGATATCGATGGATTTTAAACTGTCAAGGACTCCCTTCTCTAAGGAGCATCATTCATTTCTAAAAACACCACAGTCCTGTGAAACCATCATAGTACGCTAAAATGTCAGCTTCATTGAATACCCGATGGTGTATCCATCGGATTATAATCTTTAAAGCCCtggttaaaaacaacacaataaaataaatgtgtgtgtgtgtgtgtatataagatTTAGGAAACGGAGCTGAGCTGATGCAGTGAATAGATATGGCTCTTTTGCCCGTTATTCAAAAGTCGCCACAGACATTTCCTCCCACCTTCAGTGGATCTCGCTCTTTCCTCTGCGGCCGTTTGTCGGAGGTGTCCGAACGACGTCGCATCGGAAAGGAGAGGAAATGTTTAATGGCACCGACCATCCTGAAGGTGCACAGTAATCATGGTGTGAGCGCACAACGCACGAGGCAGGAACAATGGAGTTCACACTTTCATGAGAAATCACACATCACTGGCCAACAGTGCTGGGTTTTGGGCAACAtaaacagtgaaaaaaacagGTGGGGACGTACACAACGAGCCACGGCATTGATTTGAAAGCAACAACCAAacaccacatttaaaaaaagacaaaaaaaaacctaagaaaatgaaaaagaaagcagaaatcTTAAAAGGCTATTCCATCCATTTTCAGTGTAATTTtgaaaaactgttaaaatggtTTTTAGGGTGCAAGTCACAAACACTAGCTAGGTGAGCCACATGATGTGTGGCAATACTCCAGATACGAATACATCAGTCCTGAATTACATGAGAATACACACATCAAAATTTAAGAGTACAAGTCTTTGGTAAATATCCCAAGCACAGAAGGCAACTCCACGAAATGTCTGCTATGGTATCAGTTTTCAAATCGTCTTGGTTTCATTACTTACAACCCACTGTGGTTGTCAATTCAGGGTTACAGTTCTTATTTTGATCCGAATTTATAGCATGTGATCACAGAGTAGGTCGTAAACCCAGTTTATGGCAAAGTCACCTGTTGGCATTTTAAACTCCgctttaaaaacaagtaaaatctCGATCTTGCTCTTTGATCAACCAGATGCATCAAACAAGAGGCAGATGCGAGTCATCAAGTGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU54005 True 3428 TUCP 0.38 2 26808164 26811615

Neighbor

gene id symbol gene type direction distance location
AMCG00013273 kcnj2,LOC104928150,LOC107597836,LOC107704237 coding upstream 69330 26737554 ~ 26738834 (+)
AMCG00013274 NA coding upstream 81725 26725234 ~ 26726439 (+)
AMCG00013267 exoc7 coding upstream 199301 26588755 ~ 26608863 (+)
AMCG00013270 NA coding upstream 243996 26557768 ~ 26564168 (+)
AMCG00013269 NA coding upstream 268310 26538899 ~ 26539854 (+)
AMCG00013275 NA coding downstream 42809 26854424 ~ 26856636 (+)
AMCG00013290 NA coding downstream 51143 26862758 ~ 26870903 (+)
AMCG00013285 nploc4 coding downstream 97176 26908791 ~ 26920057 (+)
AMCG00013282 NA coding downstream 112951 26924566 ~ 26928580 (+)
AMCG00013284 NA coding downstream 117644 26929259 ~ 26963188 (+)
G43303 NA non-coding upstream 22603 26784953 ~ 26785561 (+)
G43138 NA non-coding upstream 963570 25807419 ~ 25844594 (+)
G43085 NA non-coding upstream 1186925 25620937 ~ 25621239 (+)
G43084 NA non-coding upstream 1188159 25619610 ~ 25620005 (+)
G43082 NA non-coding upstream 1203926 25603998 ~ 25604238 (+)
G43326 NA non-coding downstream 61206 26872821 ~ 26930253 (+)
G43402 NA non-coding downstream 198757 27010372 ~ 27010651 (+)
G43438 NA non-coding downstream 458413 27270028 ~ 27417787 (+)
G43673 NA non-coding downstream 1578074 28389689 ~ 28389960 (+)
G43712 NA non-coding downstream 1926508 28738123 ~ 28738753 (+)
G43263 NA other upstream 268115 26524826 ~ 26540049 (+)
AMCG00013265 LOC107672452,LOC107711237,LOC107567237,LOC107670476 other upstream 329620 26427946 ~ 26478544 (+)
AMCG00013257 LOC106612075,LOC107560953 other upstream 411459 26367795 ~ 26396705 (+)
AMCG00013255 NA other upstream 549182 26254974 ~ 26258982 (+)
AMCG00013251 NA other upstream 647025 26153236 ~ 26161139 (+)
AMCG00013281 NA other downstream 80981 26892596 ~ 26923139 (+)
AMCG00013286 pde6g,LOC102221623,LOC103367935,LOC102781464 other downstream 85894 26897509 ~ 26904963 (+)
G43434 NA other downstream 346687 27158302 ~ 27158721 (+)
AMCG00013298 NA other downstream 574050 27385665 ~ 27415286 (+)
G43476 NA other downstream 777524 27589139 ~ 27590818 (+)

Expression


Co-expression Network