G43326


Basic Information

Item Value
gene id G43326
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 26872821 ~ 26930253 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU54027
cagtattagtatggtgttcctaataatcctttaggtgagtgtatatgtataatcaAATTTCCTatgaatgtttttctaaaaaggCGGCTAAGCAACTAGTGTCTTGTCATTCTGCGTcagtgtgtggggaaaaaaaacgcTAATTCATCTGCTAGATGTTTCCATTGTCTCTTTAAAAGCATTCTACAGCATTAATGGACTTAATAAGCAAGTCAGGATCATAAAAGACTCCAatctattttgtaaattatgtttgttaattgtttttttttaatgtattattttcatttaaagtaaaatgcatttgagaggtattaaaatgttaaatactgGCAATTTAGGGCCGAACCTTTTGTAATAATACTAGATGGATGTAGGATGGGACACAGGACCACACTTTTACAGCTAGCTTTATTTACTTGACATTTAGTTTCATTTCCAATTTCCTTGTTATGATCGCCTTTGCATTTACCTTTATGACTGACTGGTCTGTTTGTACGTAAGTACTAAATGGGACATAGTGATAACACACTAAGCCACACTGAATAGGAAAAATAGGGACCCCTTTGTATTCACCTGCAAGtgatatttaacacattttgggCCTGGAATAAGACAATAATTACCTATGAAGAATTTAACATTAAACTACAGTCTTTTCAAAGGAAAgtgtattgtgtttatatatataatgtgagaaattaaaaataaaacaattaatgatGAAAgttaaaaaaaa

Function

GO: NA

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05322 Systemic lupus erythematosus
ko05020 Prion disease

RNA

RNA id representative length rna type GC content exon number start site end site
TU54027 True 739 lncRNA 0.31 2 26872821 26930253

Neighbor

gene id symbol gene type direction distance location
AMCG00013290 NA coding upstream 1918 26862758 ~ 26870903 (+)
AMCG00013275 NA coding upstream 16185 26854424 ~ 26856636 (+)
AMCG00013273 kcnj2,LOC104928150,LOC107597836,LOC107704237 coding upstream 133987 26737554 ~ 26738834 (+)
AMCG00013274 NA coding upstream 146382 26725234 ~ 26726439 (+)
AMCG00013267 exoc7 coding upstream 263958 26588755 ~ 26608863 (+)
AMCG00013289 cep131 coding downstream 33435 26963688 ~ 26981369 (+)
AMCG00013291 NA coding downstream 51422 26981675 ~ 26998680 (+)
AMCG00013283 LOC108429730 coding downstream 106362 27036615 ~ 27058921 (+)
AMCG00013287 tekt3,LOC107753251 coding downstream 181597 27111850 ~ 27117437 (+)
AMCG00013288 NA coding downstream 199911 27130164 ~ 27140599 (+)
G43303 NA non-coding upstream 87260 26784953 ~ 26785561 (+)
G43138 NA non-coding upstream 1028227 25807419 ~ 25844594 (+)
G43085 NA non-coding upstream 1251582 25620937 ~ 25621239 (+)
G43084 NA non-coding upstream 1252816 25619610 ~ 25620005 (+)
G43082 NA non-coding upstream 1268583 25603998 ~ 25604238 (+)
G43402 NA non-coding downstream 80119 27010372 ~ 27010651 (+)
G43438 NA non-coding downstream 339775 27270028 ~ 27417787 (+)
G43673 NA non-coding downstream 1459436 28389689 ~ 28389960 (+)
G43712 NA non-coding downstream 1807870 28738123 ~ 28738753 (+)
G43810 NA non-coding downstream 2219725 29149978 ~ 29151334 (+)
G43309 NA other upstream 61206 26808164 ~ 26811615 (+)
G43263 NA other upstream 332772 26524826 ~ 26540049 (+)
AMCG00013265 LOC107672452,LOC107711237,LOC107567237,LOC107670476 other upstream 394277 26427946 ~ 26478544 (+)
AMCG00013257 LOC106612075,LOC107560953 other upstream 476116 26367795 ~ 26396705 (+)
AMCG00013255 NA other upstream 613839 26254974 ~ 26258982 (+)
G43434 NA other downstream 228049 27158302 ~ 27158721 (+)
AMCG00013298 NA other downstream 455412 27385665 ~ 27415286 (+)
G43476 NA other downstream 658886 27589139 ~ 27590818 (+)
AMCG00013310 NA other downstream 998455 27928708 ~ 27935938 (+)
AMCG00013317 NA other downstream 1077261 28007514 ~ 28072799 (+)

Expression


Co-expression Network