G43434


Basic Information

Item Value
gene id G43434
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 27158302 ~ 27158721 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU54155
caccgtcaaacatggaggtggaaacattatgctttgggggtgtttttctgctaaggggacaggacaactgcaccgcatcaaagggacgatggacggggccatgtaccatcaaatcttgggtgagaacctccttccctcagccagggcattgaaaatgggtcttggatgggtattccagcatgacaatgacccaaaacacacagccaaggcaacaaaggagtggctcaagaagaagcacattaaggtcctggagtggccaagccagtctccagaccttaatcccatagaaaatctgtggagggagctgaaggttcgagttgccaaacgtcagcctcgaaaccttaatgacttggagaggatctgcaaagaggagtgggacaaaatccctcctgagatgtgtgcaaacctggtggccaacta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU54155 True 420 TUCP 0.50 1 27158302 27158721

Neighbor

gene id symbol gene type direction distance location
AMCG00013288 NA coding upstream 17703 27130164 ~ 27140599 (+)
AMCG00013287 tekt3,LOC107753251 coding upstream 40865 27111850 ~ 27117437 (+)
AMCG00013283 LOC108429730 coding upstream 99381 27036615 ~ 27058921 (+)
AMCG00013291 NA coding upstream 159622 26981675 ~ 26998680 (+)
AMCG00013289 cep131 coding upstream 176933 26963688 ~ 26981369 (+)
AMCG00013296 NA coding downstream 390084 27548805 ~ 27569295 (+)
AMCG00013299 ndel1,LOC108432229,LOC104940291,LOC107672491 coding downstream 434054 27592775 ~ 27609468 (+)
AMCG00013307 ntn1a,LOC107733905,LOC106564677,LOC107555375,LOC106587088 coding downstream 652972 27811693 ~ 27814163 (+)
AMCG00013308 LOC107555375,LOC107733905,LOC107704007,LOC105903456,LOC105012279 coding downstream 715772 27874493 ~ 27875484 (+)
AMCG00013311 NA coding downstream 777692 27936413 ~ 27946835 (+)
G43402 NA non-coding upstream 147651 27010372 ~ 27010651 (+)
G43326 NA non-coding upstream 228049 26872821 ~ 26930253 (+)
G43303 NA non-coding upstream 372741 26784953 ~ 26785561 (+)
G43138 NA non-coding upstream 1313708 25807419 ~ 25844594 (+)
G43085 NA non-coding upstream 1537063 25620937 ~ 25621239 (+)
G43438 NA non-coding downstream 111307 27270028 ~ 27417787 (+)
G43673 NA non-coding downstream 1230968 28389689 ~ 28389960 (+)
G43712 NA non-coding downstream 1579402 28738123 ~ 28738753 (+)
G43810 NA non-coding downstream 1991257 29149978 ~ 29151334 (+)
G43799 NA non-coding downstream 1997978 29156699 ~ 29158493 (+)
AMCG00013281 NA other upstream 235163 26892596 ~ 26923139 (+)
AMCG00013286 pde6g,LOC102221623,LOC103367935,LOC102781464 other upstream 253339 26897509 ~ 26904963 (+)
G43309 NA other upstream 346687 26808164 ~ 26811615 (+)
G43263 NA other upstream 618253 26524826 ~ 26540049 (+)
AMCG00013265 LOC107672452,LOC107711237,LOC107567237,LOC107670476 other upstream 679758 26427946 ~ 26478544 (+)
AMCG00013298 NA other downstream 226944 27385665 ~ 27415286 (+)
G43476 NA other downstream 430418 27589139 ~ 27590818 (+)
AMCG00013310 NA other downstream 769987 27928708 ~ 27935938 (+)
AMCG00013317 NA other downstream 848793 28007514 ~ 28072799 (+)
G43682 NA other downstream 1325552 28484273 ~ 28488783 (+)

Expression


Co-expression Network