G43684


Basic Information

Item Value
gene id G43684
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 28467312 ~ 28467906 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU54456
CCTGCTTCTGCTGTGTCTCTGCAACTTGTGCAGGAGGTGGCAGCTCACACAAACCCACTCACAACTCACTGTCCTCCTAAAGAGGACCAACACAGGACCCCTGCCAACCGGATTTCACTGGCGATGATTAGAAGTCTTACCTGGCCCGACGAGGGGGGACCGGTTCTGCGGGGCACTTGTTTGGTGAGGTGCTGCCGCCTCGGACGCGCTGTTGTTGTTGGCATTGTTGGCGGCCGTGTGGCCATGGTTCTGGCCTGGAGGCTGGCCGTGGTGcgggtggtggtgatggtggtggtggtgatggtggtggtggttgctgttgttgttgctgggGGCAGCGgggttgttgttgctgctgctgctgctgttgttgggTGCCGGGCTGCTCTGGACCACAGGGTTGTTCCTGTCCCACATGTTGACAGTCTTGTTGCAGGAGCTCGGGTCACCCCAAGCTGAGGTACCGTCGTCAATCTCCATCTTGCGCCGGATCGAGGGAGGGGAGGGCTCTTCCCACCCGGTGGGCTCCCCTCCAGGCTCCTGTTTTACTGGCCCTCCTGCTCCTCCAGGTCCTCCAggtcctcctccccctcct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU54456 True 595 TUCP 0.62 1 28467312 28467906

Neighbor

gene id symbol gene type direction distance location
AMCG00013326 nup85,LOC106601803 coding downstream 249254 28210403 ~ 28218058 (-)
AMCG00013325 LOC107724659,LOC107579769 coding downstream 267519 28196957 ~ 28199793 (-)
AMCG00013319 mchr1,LOC103354888,LOC107580882 coding downstream 337180 28128668 ~ 28130132 (-)
AMCG00013318 NA coding downstream 388610 28074541 ~ 28078702 (-)
AMCG00013313 stx8 coding downstream 539985 27917922 ~ 27927327 (-)
AMCG00013331 NA coding upstream 25040 28492946 ~ 28495999 (-)
AMCG00013332 NA coding upstream 34116 28502022 ~ 28521437 (-)
AMCG00013339 nptx1l,LOC107665615,LOC107569544,LOC106601408,LOC103375324 coding upstream 304027 28771933 ~ 28777474 (-)
AMCG00013348 prpsap1,LOC106606986,LOC106533983,LOC108255900,LOC105013149,LOC101163819 coding upstream 506784 28974690 ~ 28989005 (-)
AMCG00013349 LOC105417629 coding upstream 523531 28991437 ~ 28996380 (-)
G43670 NA non-coding downstream 119838 28343277 ~ 28347474 (-)
G43626 NA non-coding downstream 232606 28229410 ~ 28234706 (-)
G43593 NA non-coding downstream 404859 28062249 ~ 28062453 (-)
G43592 LOC105901958,LOC107704008 non-coding downstream 406143 28060844 ~ 28061169 (-)
G43590 NA non-coding downstream 501079 27966012 ~ 27966233 (-)
G43685 NA non-coding upstream 2428 28470334 ~ 28470537 (-)
G43686 NA non-coding upstream 7202 28475108 ~ 28475326 (-)
G43687 NA non-coding upstream 7550 28475456 ~ 28476100 (-)
G43688 NA non-coding upstream 9249 28477155 ~ 28477508 (-)
G43689 LOC107601217,LOC107724432,LOC107698663,LOC107753100 non-coding upstream 12179 28480085 ~ 28480483 (-)
G43594 NA other downstream 394525 28068213 ~ 28072787 (-)
G43473 NA other downstream 898161 27568764 ~ 27569151 (-)
AMCG00013295 NA other downstream 1174239 27273229 ~ 27293073 (-)
AMCG00013264 NA other downstream 1909988 26553549 ~ 26557324 (-)
AMCG00013258 NA other downstream 1982898 26479611 ~ 26484414 (-)
G43869 NA other upstream 785490 29253396 ~ 29254316 (-)
G44034 ddx5,kpna2,LOC102776273,LOC103469782,LOC108432045,LOC108261381,LOC100304957 other upstream 1458477 29926383 ~ 30028230 (-)
AMCG00013384 NA other upstream 1572299 30040205 ~ 30061634 (-)
AMCG00013386 NA other upstream 1612708 30080614 ~ 30083441 (-)
AMCG00013390 NA other upstream 1697911 30165817 ~ 30184424 (-)

Expression


Co-expression Network