G43685


Basic Information

Item Value
gene id G43685
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 28470334 ~ 28470537 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU54457
CTGGCTTGCAGGGGGCAGTTCCTGGAGGACCATTGCCCCTGCCGTAGGGCCCTGCGGGATCAGATGAGTTGTCCCCCCAGCCCCCGCAGCTGCCCGGGGGCTTTCCCCAGGCAGAGGTGCCGTTGTCCACGTTGGGGGCGGGAGAGGCCGGCTCGCCCCACGATGGCTCAGGCTTGGAGTGGACGCTGGGCAGCTCTCCCCAAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU54457 True 204 lncRNA 0.70 1 28470334 28470537

Neighbor

gene id symbol gene type direction distance location
AMCG00013326 nup85,LOC106601803 coding downstream 252276 28210403 ~ 28218058 (-)
AMCG00013325 LOC107724659,LOC107579769 coding downstream 270541 28196957 ~ 28199793 (-)
AMCG00013319 mchr1,LOC103354888,LOC107580882 coding downstream 340202 28128668 ~ 28130132 (-)
AMCG00013318 NA coding downstream 391632 28074541 ~ 28078702 (-)
AMCG00013313 stx8 coding downstream 543007 27917922 ~ 27927327 (-)
AMCG00013331 NA coding upstream 22409 28492946 ~ 28495999 (-)
AMCG00013332 NA coding upstream 31485 28502022 ~ 28521437 (-)
AMCG00013339 nptx1l,LOC107665615,LOC107569544,LOC106601408,LOC103375324 coding upstream 301396 28771933 ~ 28777474 (-)
AMCG00013348 prpsap1,LOC106606986,LOC106533983,LOC108255900,LOC105013149,LOC101163819 coding upstream 504153 28974690 ~ 28989005 (-)
AMCG00013349 LOC105417629 coding upstream 520900 28991437 ~ 28996380 (-)
G43670 NA non-coding downstream 122860 28343277 ~ 28347474 (-)
G43626 NA non-coding downstream 235628 28229410 ~ 28234706 (-)
G43593 NA non-coding downstream 407881 28062249 ~ 28062453 (-)
G43592 LOC105901958,LOC107704008 non-coding downstream 409165 28060844 ~ 28061169 (-)
G43590 NA non-coding downstream 504101 27966012 ~ 27966233 (-)
G43686 NA non-coding upstream 4571 28475108 ~ 28475326 (-)
G43687 NA non-coding upstream 4919 28475456 ~ 28476100 (-)
G43688 NA non-coding upstream 6618 28477155 ~ 28477508 (-)
G43689 LOC107601217,LOC107724432,LOC107698663,LOC107753100 non-coding upstream 9548 28480085 ~ 28480483 (-)
G43690 NA non-coding upstream 11195 28481732 ~ 28482055 (-)
G43684 NA other downstream 2428 28467312 ~ 28467906 (-)
G43594 NA other downstream 397547 28068213 ~ 28072787 (-)
G43473 NA other downstream 901183 27568764 ~ 27569151 (-)
AMCG00013295 NA other downstream 1177261 27273229 ~ 27293073 (-)
AMCG00013264 NA other downstream 1913010 26553549 ~ 26557324 (-)
G43869 NA other upstream 782859 29253396 ~ 29254316 (-)
G44034 ddx5,kpna2,LOC102776273,LOC103469782,LOC108432045,LOC108261381,LOC100304957 other upstream 1455846 29926383 ~ 30028230 (-)
AMCG00013384 NA other upstream 1569668 30040205 ~ 30061634 (-)
AMCG00013386 NA other upstream 1610077 30080614 ~ 30083441 (-)
AMCG00013390 NA other upstream 1695280 30165817 ~ 30184424 (-)

Expression


Co-expression Network