G43724


Basic Information

Item Value
gene id G43724
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 28716291 ~ 28717940 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU54508
CGCAGGGCTCCCATGTGACCAGGTGGCCGGGCTTCTACATCCTCCAGTGGAAGTTCCACAGCATGCCGGCCTGCGCCACCACCAACCTGCCGCGCGTGGACGACGTGCTGGCCAGCCTGCAGGTGTCCTCCCACAAGTGCAAGGTCATGTACTACACCGAGGTGCTGGGCTCCGAGGACTTCCGAAACGCTTGCTGTGATGTGCAGAGTTTGTAAGTGAATTTGAATTTACTCGCTGTCTTCATTAGGGGTGTCGTAGTCGTCCTGATGCTTCGAGACGCTGGGTGCTGCTGCTGACGGTTGATCTTGTTGTAGAAAGAGAGTTTCCTGCTCCGCTCAGGGGCCAGATA

Function

NR:

description
PREDICTED: uncharacterized protein LOC108263482

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU54508 True 349 lncRNA 0.58 2 28716291 28717940

Neighbor

gene id symbol gene type direction distance location
AMCG00013332 NA coding downstream 194854 28502022 ~ 28521437 (-)
AMCG00013331 NA coding downstream 220292 28492946 ~ 28495999 (-)
AMCG00013326 nup85,LOC106601803 coding downstream 498233 28210403 ~ 28218058 (-)
AMCG00013325 LOC107724659,LOC107579769 coding downstream 516498 28196957 ~ 28199793 (-)
AMCG00013319 mchr1,LOC103354888,LOC107580882 coding downstream 586159 28128668 ~ 28130132 (-)
AMCG00013339 nptx1l,LOC107665615,LOC107569544,LOC106601408,LOC103375324 coding upstream 53993 28771933 ~ 28777474 (-)
AMCG00013348 prpsap1,LOC106606986,LOC106533983,LOC108255900,LOC105013149,LOC101163819 coding upstream 256750 28974690 ~ 28989005 (-)
AMCG00013349 LOC105417629 coding upstream 273497 28991437 ~ 28996380 (-)
AMCG00013347 aanat coding upstream 343948 29061888 ~ 29063240 (-)
AMCG00013353 NA coding upstream 381047 29098987 ~ 29114047 (-)
G43691 NA non-coding downstream 225195 28488842 ~ 28491096 (-)
G43690 NA non-coding downstream 234236 28481732 ~ 28482055 (-)
G43689 LOC107601217,LOC107724432,LOC107698663,LOC107753100 non-coding downstream 235808 28480085 ~ 28480483 (-)
G43688 NA non-coding downstream 238783 28477155 ~ 28477508 (-)
G43687 NA non-coding downstream 240191 28475456 ~ 28476100 (-)
G43725 NA non-coding upstream 20017 28737957 ~ 28738773 (-)
G43834 znf207,LOC107753267 non-coding upstream 397282 29115222 ~ 29117961 (-)
G43831 NA non-coding upstream 401433 29119373 ~ 29121319 (-)
G43919 NA non-coding upstream 779770 29497710 ~ 29499573 (-)
G44086 NA non-coding upstream 1370863 30088803 ~ 30090147 (-)
G43684 NA other downstream 248385 28467312 ~ 28467906 (-)
G43594 NA other downstream 643504 28068213 ~ 28072787 (-)
G43473 NA other downstream 1147140 27568764 ~ 27569151 (-)
AMCG00013295 NA other downstream 1423218 27273229 ~ 27293073 (-)
AMCG00013264 NA other downstream 2158967 26553549 ~ 26557324 (-)
G43869 NA other upstream 535456 29253396 ~ 29254316 (-)
G44034 ddx5,kpna2,LOC102776273,LOC103469782,LOC108432045,LOC108261381,LOC100304957 other upstream 1208443 29926383 ~ 30028230 (-)
AMCG00013384 NA other upstream 1322265 30040205 ~ 30061634 (-)
AMCG00013386 NA other upstream 1362674 30080614 ~ 30083441 (-)
AMCG00013390 NA other upstream 1447877 30165817 ~ 30184424 (-)

Expression


Co-expression Network