G43725


Basic Information

Item Value
gene id G43725
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 28737957 ~ 28738773 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU54511
accgatcagccataacattatgaccactgacaggtgaagtgaataacactgataatctcgttatcatggcacctgtcagtgggtgggatatattagacagcaagtgaacattttgtcctcaaagttgatgtgttagaagcaggaaaaatgggcaagagtaaggatctgagtgactttgacaagggcctctccaaaactgcagctcttgtggggtgttcccggtctgcagtgctcagtacctatcaaaagtggtccaaggaaggaaaagcggtgaaccggcgacagggtcatggcggccaaggctcactgatgcacgtggggagcgaaggctggcccgtgtggtccgatccaacagacggacctacacaatattaggcaggtggtcgtaatgttatgg

Function

NR:

description
PREDICTED: uncharacterized protein LOC108263482

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU54511 True 397 lncRNA 0.50 3 28737957 28738773

Neighbor

gene id symbol gene type direction distance location
AMCG00013332 NA coding downstream 216520 28502022 ~ 28521437 (-)
AMCG00013331 NA coding downstream 241958 28492946 ~ 28495999 (-)
AMCG00013326 nup85,LOC106601803 coding downstream 519899 28210403 ~ 28218058 (-)
AMCG00013325 LOC107724659,LOC107579769 coding downstream 538164 28196957 ~ 28199793 (-)
AMCG00013319 mchr1,LOC103354888,LOC107580882 coding downstream 607825 28128668 ~ 28130132 (-)
AMCG00013339 nptx1l,LOC107665615,LOC107569544,LOC106601408,LOC103375324 coding upstream 33160 28771933 ~ 28777474 (-)
AMCG00013348 prpsap1,LOC106606986,LOC106533983,LOC108255900,LOC105013149,LOC101163819 coding upstream 235917 28974690 ~ 28989005 (-)
AMCG00013349 LOC105417629 coding upstream 252664 28991437 ~ 28996380 (-)
AMCG00013347 aanat coding upstream 323115 29061888 ~ 29063240 (-)
AMCG00013353 NA coding upstream 360214 29098987 ~ 29114047 (-)
G43724 NA non-coding downstream 20017 28716291 ~ 28717940 (-)
G43691 NA non-coding downstream 246861 28488842 ~ 28491096 (-)
G43690 NA non-coding downstream 255902 28481732 ~ 28482055 (-)
G43689 LOC107601217,LOC107724432,LOC107698663,LOC107753100 non-coding downstream 257474 28480085 ~ 28480483 (-)
G43688 NA non-coding downstream 260449 28477155 ~ 28477508 (-)
G43834 znf207,LOC107753267 non-coding upstream 376449 29115222 ~ 29117961 (-)
G43831 NA non-coding upstream 380600 29119373 ~ 29121319 (-)
G43919 NA non-coding upstream 758937 29497710 ~ 29499573 (-)
G44086 NA non-coding upstream 1350030 30088803 ~ 30090147 (-)
G44230 NA non-coding upstream 1568253 30307026 ~ 30310766 (-)
G43684 NA other downstream 270051 28467312 ~ 28467906 (-)
G43594 NA other downstream 665170 28068213 ~ 28072787 (-)
G43473 NA other downstream 1168806 27568764 ~ 27569151 (-)
AMCG00013295 NA other downstream 1444884 27273229 ~ 27293073 (-)
AMCG00013264 NA other downstream 2180633 26553549 ~ 26557324 (-)
G43869 NA other upstream 514623 29253396 ~ 29254316 (-)
G44034 ddx5,kpna2,LOC102776273,LOC103469782,LOC108432045,LOC108261381,LOC100304957 other upstream 1187610 29926383 ~ 30028230 (-)
AMCG00013384 NA other upstream 1301432 30040205 ~ 30061634 (-)
AMCG00013386 NA other upstream 1341841 30080614 ~ 30083441 (-)
AMCG00013390 NA other upstream 1427044 30165817 ~ 30184424 (-)

Expression


Co-expression Network