G43802


Basic Information

Item Value
gene id G43802
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 29104289 ~ 29104577 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU54615
CCCCCCAGGATACAGAGTTGTATATGTGGCACAATCTGAGGCCACACTCAGCATATGGCAAACTCCAACTCCGCAGCTCTCACCGAATGCACCTTTACAGCGAGATTGTAAAACTCTCCTCCCCCGAGGAAGAGACACCAACCTGTCACGACGAGTGTGTGCGGCACGCCGGCCTCGGTGAGCATCCCCTGGATGTGGCTGTTGAAGAGCGAGAGGCCCTGTCCCTTCCCGCTGTGGGGGttgagcagcagcaggagacGACCGGGTGTCGGCAGCATGTCGTACAGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU54615 True 289 TUCP 0.59 1 29104289 29104577

Neighbor

gene id symbol gene type direction distance location
AMCG00013351 ube2o coding upstream 12682 29080000 ~ 29091607 (+)
AMCG00013350 NA coding upstream 35887 29067830 ~ 29068402 (+)
AMCG00013344 NA coding upstream 44649 29033142 ~ 29059640 (+)
AMCG00013346 NA coding upstream 75081 29022007 ~ 29029208 (+)
AMCG00013345 NA coding upstream 93014 29004045 ~ 29011275 (+)
AMCG00013352 znf207 coding downstream 10876 29115453 ~ 29121435 (+)
AMCG00013356 ern1,LOC106601756,LOC106606681 coding downstream 45665 29150242 ~ 29156585 (+)
AMCG00013363 prkca,LOC107664393 coding downstream 463912 29568489 ~ 29573439 (+)
AMCG00013365 LOC108437159,LOC101159746,LOC108259727,LOC103469320,LOC102304961,LOC108239241 coding downstream 481674 29586251 ~ 29627558 (+)
AMCG00013367 cacng4,LOC107548710 coding downstream 593255 29697832 ~ 29710210 (+)
G43712 NA non-coding upstream 365536 28738123 ~ 28738753 (+)
G43673 NA non-coding upstream 714329 28389689 ~ 28389960 (+)
G43438 NA non-coding upstream 1686502 27270028 ~ 27417787 (+)
G43402 NA non-coding upstream 2093638 27010372 ~ 27010651 (+)
G43326 NA non-coding upstream 2174036 26872821 ~ 26930253 (+)
G43810 NA non-coding downstream 45401 29149978 ~ 29151334 (+)
G43799 NA non-coding downstream 52122 29156699 ~ 29158493 (+)
G43853 NA non-coding downstream 72474 29177051 ~ 29178266 (+)
G43855 NA non-coding downstream 74521 29179098 ~ 29202721 (+)
G43895 NA non-coding downstream 329473 29434050 ~ 29446698 (+)
AMCG00013336 NA other upstream 418151 28676542 ~ 28686138 (+)
G43682 NA other upstream 615506 28484273 ~ 28488783 (+)
AMCG00013317 NA other upstream 1031490 28007514 ~ 28072799 (+)
AMCG00013310 NA other upstream 1168351 27928708 ~ 27935938 (+)
G43476 NA other upstream 1513471 27589139 ~ 27590818 (+)
AMCG00013364 cacng5,cacng5b,LOC107586339,LOC107569463,LOC107716884,LOC107688812,LOC107710162,LOC108437158,LOC107710696,LOC107698772 other downstream 536046 29640623 ~ 29667051 (+)
AMCG00013375 bptf,LOC105013188,LOC106607015,LOC103359999 other downstream 781185 29885762 ~ 29928697 (+)
AMCG00013382 NA other downstream 958803 30063380 ~ 30074748 (+)
AMCG00013388 NA other downstream 979067 30083644 ~ 30090117 (+)
AMCG00013396 tbc1d16,LOC106597465,LOC106606686 other downstream 1114333 30218910 ~ 30229021 (+)

Expression


Co-expression Network