G43834 (znf207,LOC107753267)


Basic Information

Item Value
gene id G43834
gene name znf207,LOC107753267
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 29115222 ~ 29117961 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU54654
CGAGTACACTAATGGCATTACAAAACACCATACAATATCTGAATCAGGGGTGCATTGCTAACCTACACCAAAACAGACTCCTCACCTGGGGGCATACCGGGCATCATTGGGGGCATCCCGGGTCCAGGGGGCATCATCCCACCCATTGGCATCATACTGTGAGGAacaatatttttccatttagcTTAGGACTACAAAACACACAAGGCTGCCAGTCACATGAAAGTGGTGCCGTTTTGAAAACAGCATAACAACATCACTTCTATACTAACACAAGGGCTTGACATGATGCTCACTTACCCTGGGGGCATTCCGGGCATTACAGGGGGCATACCGGGCATCATGGGAGGAACTCCAGGCATCATGGGGGGCATTCCTGAGAAGTTCCCCGGTGGCATTCCCGGAGCCCCGGGCACGTGGGGCATTCCCGGCTGGGTCATGGGGGGCATAAAGCCTGTCTGGGGCTGCATTGGTTGTTGCTGGAAAGAAGGACCCGGCTCTTCTTCCTCCTCATAATCATCCGAATCCTCCTGgttgttctgtttctttttctgacTTTCAGcttgtgttttttgttctagtACCCGTCTCCTCTCTTCCATGTCCTTTTCTGGAATACCTTCCATGCCATAGATCTCCAATTCAATGTCCGTCCTGCCAGGTATCGCATTGGGAACACCATCTATTGTTTCTTTGTGAACCTGCATACAATGAATAGCTAAGCCCGGGCCCGTGTATAGTTTTTTATGACATATATGACACTTGAAGTGTTTTGCTTTCTGGTGCTGTATAAGAATCTTCTCGTCGTCAAAATCTCTGTTGCAGTACCTGTGCAGTTTCAGCACCACGGCTTcatctgcttcttcttcttccttcccATGGTTTGGGTTTAGTCTGAGCCGGAGAAAATGCACAGAGAGAGGCGAGGCGAGGCGAGGCGAGGCGAACACACCGCCTACAAAGATAGCAGAGAAAATGGCGTCTCCGGCCCGACAGGCTTCTCACTCTTCCCACAATCCTCCGCGGCAGATAACCATTCAACCCCCTGACTTATCAGTGGTGGAAATGCGCGGACCGTGTGTCAGtcaattacatataattacttTAAACAATACTTAGTTTTG
>TU54656
CGAGTACACTAATGGCATTACAAAACACCATACAATATCTGAATCAGGGGTGCATTGCTAACCTACACCAAAACAGACTCCTCACCTGGGGGCATACCGGGCATCATTGGGGGCATCCCGGGTCCAGGGGGCATCATCCCACCCATTGGCATCATACTGTGAGGAacaatatttttccatttagcTTAGGACTACAAAACACACAAGGCTGCCAGTCACATGAAAGTGGTGCCGTTTTGAAAACAGCATAACAACATCACTTCTATACTAACACAAGGGCTTGACATGATGCTCACTTACCCTGGGGGCATTCCGGGCATTACAGGGGGCATACCGGGCATCATGGGAGGAACTCCAGGCATCATGGGGGGCATTCCTGAGAAGTTCCCCGGTGGCATTCCCGGAGCCCCGGGCACGTGGGGCATTCCCGGCTGGGTCATGGGGGGCATAAAGCCTGTCTGGGGCTGCATTGGTTGTTGCTGGAAAGAAGGACCCGGCTCTTCTTCCTCCTCATAATCATCCGAATCCTCCTGgttgttctgtttctttttctgacTTTCAGcttgtgttttttgttctagtACCCGTCTCCTCTCTTCCATGTCCTTTTCTGGAATACCTTCCATGCCATAGATCTCCAATTCAATGTCCGTCCTGCCAGGTATCGCATTGGGAACACCATCTATTGTTTCTTTGTGAACCTATACAATGAATAGCTAAGCCCGGGCCCGTGTATAGTTTTTTATGACATATATGACACTTGAAGTGTTTTGCTTTCTGGTGCTGTATAAGAATCTTCTCGTCGTCAAAATCTCTGTTGCAGTACCAGCACCACGGCTTcatctgcttcttcttcttccttcccATGGTTTGGGTTTAGTCTGAGCCGGAGAAAATGCACAGAGAGAGGCGAGGCGAGGCGAGGCGAGGCGAACACACCGCCTACAAAGATAGCAGAGAAAATGGCGTCTCCGGCCCGACAGGCTTCTCACTCTTCCCACAATCCTCCGCGGCAGATAACCATTCAACCCCCTGACTTATCAGTGGTGGAAATGCGCGGACCGTGTGTCAGtcaattacatataattacttTAAACAATACTTAGTTTTG

Function

symbol description
znf207 Enables microtubule binding activity. Involved in several processes, including mitotic nuclear division; mitotic spindle assembly checkpoint signaling; and protein stabilization. Located in kinetochore; nuclear lumen; and spindle matrix.

NR:

description
PREDICTED: BUB3-interacting and GLEBS motif-containing protein ZNF207 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU54654 True 1124 lncRNA 0.49 5 29115222 29117961
TU54656 False 1111 lncRNA 0.49 5 29115222 29117961

Neighbor

gene id symbol gene type direction distance location
AMCG00013353 NA coding downstream 1175 29098987 ~ 29114047 (-)
AMCG00013347 aanat coding downstream 51982 29061888 ~ 29063240 (-)
AMCG00013349 LOC105417629 coding downstream 118842 28991437 ~ 28996380 (-)
AMCG00013348 prpsap1,LOC106606986,LOC106533983,LOC108255900,LOC105013149,LOC101163819 coding downstream 126217 28974690 ~ 28989005 (-)
AMCG00013339 nptx1l,LOC107665615,LOC107569544,LOC106601408,LOC103375324 coding downstream 337748 28771933 ~ 28777474 (-)
AMCG00013355 NA coding upstream 9510 29127471 ~ 29155513 (-)
AMCG00013354 ern1 coding upstream 43269 29161230 ~ 29173911 (-)
AMCG00013357 NA coding upstream 60367 29178328 ~ 29202068 (-)
AMCG00013358 NA coding upstream 115211 29233172 ~ 29238257 (-)
AMCG00013359 NA coding upstream 164703 29282664 ~ 29304026 (-)
G43714 NA non-coding downstream 347870 28676824 ~ 28767352 (-)
G43725 NA non-coding downstream 376449 28737957 ~ 28738773 (-)
G43724 NA non-coding downstream 397282 28716291 ~ 28717940 (-)
G43691 NA non-coding downstream 624126 28488842 ~ 28491096 (-)
G43690 NA non-coding downstream 633167 28481732 ~ 28482055 (-)
G43831 NA non-coding upstream 1412 29119373 ~ 29121319 (-)
G43919 NA non-coding upstream 379749 29497710 ~ 29499573 (-)
G44086 NA non-coding upstream 970842 30088803 ~ 30090147 (-)
G44230 NA non-coding upstream 1189065 30307026 ~ 30310766 (-)
G44213 NA non-coding upstream 1266725 30384686 ~ 30455606 (-)
G43684 NA other downstream 647316 28467312 ~ 28467906 (-)
G43594 NA other downstream 1042435 28068213 ~ 28072787 (-)
G43473 NA other downstream 1546071 27568764 ~ 27569151 (-)
AMCG00013295 NA other downstream 1822149 27273229 ~ 27293073 (-)
AMCG00013264 NA other downstream 2557898 26553549 ~ 26557324 (-)
G43869 NA other upstream 135435 29253396 ~ 29254316 (-)
G44034 ddx5,kpna2,LOC102776273,LOC103469782,LOC108432045,LOC108261381,LOC100304957 other upstream 808422 29926383 ~ 30028230 (-)
AMCG00013384 NA other upstream 922244 30040205 ~ 30061634 (-)
AMCG00013386 NA other upstream 962653 30080614 ~ 30083441 (-)
AMCG00013390 NA other upstream 1047856 30165817 ~ 30184424 (-)

Expression


Co-expression Network