G44086


Basic Information

Item Value
gene id G44086
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 30088803 ~ 30090147 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU54958
GTCTTAATGTGTCGTAATGAGGACTCCAGATCTGAGGCACGAATCAAGACCTTTATTATTGTACGTGATCCAAGACTCGATACTTGTGCGCATCTCGAAACATCCGCTCCCAGCAAAAGCCTCATTTACGgacaatttgtattttccaaaacatggtgacatttccattaaaaataaaagcacataaaCATCACATCAGCAGATGAGAAATGCcgtaaacattaaattatgaGAAAATTAGTTCTCATTGTATCATTGTGTGGTGCGACAACACGTAGTTTGTGGAATATGTgacatcaataaataacaagCCGACATCGTCAGTTATAGACACACAGGCTGAAAACCCAATGCAGTCAGAGAACTCTATACAGTTGGTTGGTCAGCACATTCTActgaagtttaattaattagtggAATGCTAATTGATTAtcaattgaatatctatttcatattaaattggGCCACACAATCTAGtgttaacaaaatatattatttcttattagAGTTTCTACAGGGCTGGACTTTTGCACCACCCTGAGTCAGGtcacaaattaaacttttttagtattaaataacaaaatacaaattcttcACCTCCATCTCCTGCTCTGGACTCTCCACTTCCTCTTGTTTAGcataatttgcaaaaaaaagCTGGTCTCAGGTCGCTTCATTTATGTCTTTCAAGATGAGCTTATTAAGACACCCTTTCGTTGGTGAAGACAACAGCTTATTATTGTGCAGAGGAAGGCAGCAGCCGACAGAGACGCGTATCGGGGTGCGAAGGGCTTGTCTGGGGAGCTTTCTATAACCCAGTGACGACAACTCAATAACTTAGTGTTACAACTCAGGAGTACTGTAGATATTtgctacacaacacagcactacGCTCAGCTTAGGGCCAAGtttcttaaaatgttaatagaGTCTGATCATGGATAATGGTCAGTCCAACTGGAGAAGCATGTgctcacacccacacacgcctacacacacccacacacacccccacaatGCTTCAGGAAGAGATTAAGTTAGTAAATGCCTCATCCATATATTTTAccaaacagattttctttttctctgtaaaCTAAGTGGCCCGATTAGCCAGGCTAGATAAACAGCTCAGTCCAGGGCGAGGGGTGTAAAGGTGTGACAGGCCACCCTTAACGCACGGTGCGCTGGGTTAGCTACTGAACACTGCCTGCGACAACGCCAACAAATAATCCACATCAGCGGCTGCTTTCTGTAGCTTTGTTGCATTAGAGGTAACGCACATTACAGTAGTGTTTGCGATACGATAAAGTTTCTCAGTGTGGACTCGGATGAATCGtctccttcc

Function

NR:

description
PREDICTED: single-stranded DNA-binding protein 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU54958 True 1345 lncRNA 0.41 1 30088803 30090147

Neighbor

gene id symbol gene type direction distance location
AMCG00013385 NA coding downstream 85921 29991300 ~ 30002882 (-)
AMCG00013376 LOC107081327 coding downstream 153633 29931650 ~ 29935170 (-)
AMCG00013372 psmd12 coding downstream 285560 29796583 ~ 29803243 (-)
AMCG00013373 LOC106564877 coding downstream 294677 29746227 ~ 29794126 (-)
AMCG00013361 NA coding downstream 639322 29445941 ~ 29449481 (-)
AMCG00013389 rhbdl3 coding upstream 1715 30091862 ~ 30100704 (-)
AMCG00013391 NA coding upstream 27653 30117800 ~ 30126501 (-)
AMCG00013393 rhot1a,LOC108430568,LOC107729179 coding upstream 36550 30126697 ~ 30153358 (-)
AMCG00013392 NA coding upstream 65115 30155262 ~ 30164478 (-)
AMCG00013404 NA coding upstream 232118 30322265 ~ 30332700 (-)
G43919 NA non-coding downstream 589230 29497710 ~ 29499573 (-)
G43831 NA non-coding downstream 967484 29119373 ~ 29121319 (-)
G43834 znf207,LOC107753267 non-coding downstream 970842 29115222 ~ 29117961 (-)
G43714 NA non-coding downstream 1321451 28676824 ~ 28767352 (-)
G44230 NA non-coding upstream 216879 30307026 ~ 30310766 (-)
G44213 NA non-coding upstream 294539 30384686 ~ 30455606 (-)
G44261 NA non-coding upstream 443824 30533971 ~ 30539317 (-)
G44256 arhgdia,LOC107665665,LOC107654583 non-coding upstream 450166 30540313 ~ 30562691 (-)
G44264 NA non-coding upstream 461242 30551389 ~ 30552050 (-)
AMCG00013386 NA other downstream 5362 30080614 ~ 30083441 (-)
AMCG00013384 NA other downstream 27169 30040205 ~ 30061634 (-)
G44034 ddx5,kpna2,LOC102776273,LOC103469782,LOC108432045,LOC108261381,LOC100304957 other downstream 60573 29926383 ~ 30028230 (-)
G43869 NA other downstream 834487 29253396 ~ 29254316 (-)
G43684 NA other downstream 1620897 28467312 ~ 28467906 (-)
AMCG00013390 NA other upstream 75670 30165817 ~ 30184424 (-)
AMCG00013405 NA other upstream 196495 30286642 ~ 30290867 (-)
G44243 NA other upstream 309740 30399887 ~ 30423025 (-)
AMCG00013409 LOC107590438 other upstream 365580 30455727 ~ 30464091 (-)
AMCG00013412 NA other upstream 378483 30468630 ~ 30482326 (-)

Expression


Co-expression Network