G44182


Basic Information

Item Value
gene id G44182
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 30455672 ~ 30457671 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU55089
cAAACTCTTGCCGGCGGGACACGGCAGTTGGAATAAAACGGGACACGCACCCAGCTGCAAAACATGGACTTTATTCAGTGACCGTGACCGTGGCCTGCGGCACAGCGCATGCAAACAGCGAGCAGAACCAGGCCAGGCAGCGCCGCCACAATACTGAGGTAAGAACAGGGCTCACCCCCAAGCTCAATGCAACTGCGCTTTCACAGCTTTCAGTAAAGGTGCTGAGCACACGGGGTGACTACAGCTGAGGCAGGAGGGGCAGCAGAAGCAACTGGGACTGGAAGCTTGTCTTAATATTTAACAACCTGTTCCCTGAGCCAATCGTCACCCTCAGCTTGAAGCCACCGCCCCCCTCGCTGACATTGTTGTTGTTCACAGGAAACAGGCCAACCACTTCCATGTCAAAGGTCACGGAGGAGCCCACCGACACCGCGGGCAGCTGGTTGGTCATCTCCTTGCCATTGACATACACGGCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU55089 True 477 lncRNA 0.56 2 30455672 30457671

Neighbor

gene id symbol gene type direction distance location
AMCG00013407 NA coding upstream 2718 30439674 ~ 30452954 (+)
AMCG00013406 rab11fip4a,LOC107654480,LOC108274243,LOC106564646,LOC107688103 coding upstream 65196 30365872 ~ 30390476 (+)
AMCG00013401 NA coding upstream 103837 30345321 ~ 30351835 (+)
AMCG00013402 NA coding upstream 139253 30311722 ~ 30316419 (+)
AMCG00013400 LOC108248236 coding upstream 144881 30302820 ~ 30310791 (+)
AMCG00013418 NA coding downstream 68184 30525855 ~ 30534025 (+)
AMCG00013415 arhgdia,LOC107654583 coding downstream 79132 30536803 ~ 30541363 (+)
AMCG00013414 p4hb,LOC107591928 coding downstream 89972 30547643 ~ 30557225 (+)
AMCG00013413 ppp1r27,LOC107087444,LOC101068817,LOC107748880,LOC107558871,LOC108242930,LOC101162449 coding downstream 102810 30560481 ~ 30562562 (+)
AMCG00013424 NA coding downstream 250114 30707785 ~ 30711079 (+)
G43895 NA non-coding upstream 1008974 29434050 ~ 29446698 (+)
G43855 NA non-coding upstream 1252951 29179098 ~ 29202721 (+)
G43853 NA non-coding upstream 1277406 29177051 ~ 29178266 (+)
G43799 NA non-coding upstream 1297179 29156699 ~ 29158493 (+)
G43810 NA non-coding upstream 1304338 29149978 ~ 29151334 (+)
G44306 NA non-coding downstream 276865 30734536 ~ 30734795 (+)
G44307 NA non-coding downstream 279138 30736809 ~ 30737487 (+)
G44322 NA non-coding downstream 314710 30772381 ~ 30774068 (+)
G44323 NA non-coding downstream 316511 30774182 ~ 30774548 (+)
G44379 NA non-coding downstream 465075 30922746 ~ 30934437 (+)
AMCG00013408 NA other upstream 25023 30425007 ~ 30430649 (+)
AMCG00013399 NA other upstream 111667 30339802 ~ 30344005 (+)
AMCG00013396 tbc1d16,LOC106597465,LOC106606686 other upstream 226651 30218910 ~ 30229021 (+)
AMCG00013388 NA other upstream 365555 30083644 ~ 30090117 (+)
AMCG00013382 NA other upstream 380924 30063380 ~ 30074748 (+)
AMCG00013416 alyref,LOC106606979 other downstream 33156 30490827 ~ 30496613 (+)
AMCG00013417 mcrip1,LOC106601427,LOC106606980 other downstream 105569 30563240 ~ 30568219 (+)
G44325 NA other downstream 319180 30776851 ~ 30777169 (+)
AMCG00013468 NA other downstream 1443859 31901530 ~ 31911801 (+)
AMCG00013473 LOC105911162,LOC105012052,LOC107580644,LOC107566293,LOC107577119,LOC107725066 other downstream 1815597 32273268 ~ 32284951 (+)

Expression


Co-expression Network