G44243


Basic Information

Item Value
gene id G44243
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 30399887 ~ 30423025 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU55155
GTGGAATTGGTTTCCCAGGCAGATGTGTGCGATGCTCTCATTGGTTAACAATACGCAATGTGCTCTTTAAAGGGATCCTGTTGAAACACACCCTGCGCGCTGCAGATCCTCGCTCCTCCGGGCGGTGGCGACAGTAATCTAATGAGCAGCGGCGCGGCGCAGGGCTCACTCTCTGCCCGACACAAGCCCTCTCCAGCGGCCCAGGCTCGGCTGCGCCACACACCGACGCGGCACTGCACGGCGCACACTGCCCCCCGGGGTGGCACAGCGGGCTGGAGAGCTGGACCGCCACAAGCCAGGTGCCCCCCCCCGGGACATGTCATTACTGAGAGAAATAGACAGAGGGGGAAAACTTTCTAGGCTCTTCCTCTGGCCGCTGCGCTACAGTGTTGCAATGGGCGCCTCTCGCCTCGCtggatacagacacacacaggcatgtaTATTTGGAGGGCAGTCTCTTGGGATGTGTTCCTTGGATTTGTTTCTGAATGCGAAGTGTTGCAATTCTTCCCTGCGAATCGCCTGACTTTCTGACTGAATTACAGTCGCCTGTGCAGGAACATGAATATAAGAAttaccccccacacccccacccttTCATTTTTTCCTGCTGGTTTTAAGTGGGGACTGGTTCACATGTTCAGACTGGATGTCCTCTGACTCTGCTCTCACTCGTCCTCCGCCGAGCCCAGCCCAGCCCGACTCCTTGTGCTGCGGAGGGACCCTGACCGCCCCAGGACTGGCAGCCCACTCGGACCCTCAGCCCCCCAGCCCGGCACCGCGGGCAGCCCGGTCTCTGTGCCAGATGACTCATCCCTGGCGGCTGTGTGCCTCCCATGGGACCCGCGCTGCCCTGGCTGGGGGGCTGGGAGCTGATGACTCAGGGTGCGGAGCTGTGTGGGGGGGCGGACGGTGGAATTACTCATCAGGACATGCGGAATCTCATACAGCTGCTAGAGAGCCAGCTCCTCCACCTCATCTCATTAGCACCACTGCTGCACCCGGGTACGGCCAGCTGAAGGAGTGGGGGTGTGTGGAGGCCGGCTTCACGACACCGAGGAGAAAGTCAGCTTTTAATGACTCGACCACATCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU55155 True 1094 TUCP 0.60 3 30399887 30423025

Neighbor

gene id symbol gene type direction distance location
AMCG00013403 NA coding downstream 59426 30333448 ~ 30340461 (-)
AMCG00013404 NA coding downstream 67187 30322265 ~ 30332700 (-)
AMCG00013392 NA coding downstream 235409 30155262 ~ 30164478 (-)
AMCG00013393 rhot1a,LOC108430568,LOC107729179 coding downstream 246529 30126697 ~ 30153358 (-)
AMCG00013391 NA coding downstream 273386 30117800 ~ 30126501 (-)
AMCG00013410 NA coding upstream 7639 30430664 ~ 30436741 (-)
AMCG00013419 NA coding upstream 84926 30507951 ~ 30521671 (-)
AMCG00013420 NA coding upstream 100882 30523907 ~ 30533879 (-)
AMCG00013421 NA coding upstream 200951 30623976 ~ 30635826 (-)
AMCG00013430 LOC104954087 coding upstream 270050 30693075 ~ 30697703 (-)
G44230 NA non-coding downstream 89121 30307026 ~ 30310766 (-)
G44086 NA non-coding downstream 309740 30088803 ~ 30090147 (-)
G43919 NA non-coding downstream 900314 29497710 ~ 29499573 (-)
G43831 NA non-coding downstream 1278568 29119373 ~ 29121319 (-)
G43834 znf207,LOC107753267 non-coding downstream 1281926 29115222 ~ 29117961 (-)
G44261 NA non-coding upstream 110946 30533971 ~ 30539317 (-)
G44256 arhgdia,LOC107665665,LOC107654583 non-coding upstream 117288 30540313 ~ 30562691 (-)
G44264 NA non-coding upstream 128364 30551389 ~ 30552050 (-)
G44259 p4hb,LOC107591928 non-coding upstream 130756 30553781 ~ 30599051 (-)
G44330 NA non-coding upstream 349517 30772542 ~ 30774110 (-)
AMCG00013405 NA other downstream 109020 30286642 ~ 30290867 (-)
AMCG00013390 NA other downstream 215463 30165817 ~ 30184424 (-)
AMCG00013386 NA other downstream 316446 30080614 ~ 30083441 (-)
AMCG00013384 NA other downstream 338253 30040205 ~ 30061634 (-)
G44034 ddx5,kpna2,LOC102776273,LOC103469782,LOC108432045,LOC108261381,LOC100304957 other downstream 371657 29926383 ~ 30028230 (-)
AMCG00013409 LOC107590438 other upstream 32702 30455727 ~ 30464091 (-)
AMCG00013412 NA other upstream 45605 30468630 ~ 30482326 (-)
AMCG00013411 anapc11,LOC107553313,LOC106564932 other upstream 60280 30483305 ~ 30486331 (-)
AMCG00013425 NA other upstream 307262 30730287 ~ 30742643 (-)
G44719 NA other upstream 2142735 32565760 ~ 32567952 (-)

Expression


Co-expression Network