G44264


Basic Information

Item Value
gene id G44264
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 30551389 ~ 30552050 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU55192
CAAGTCATCTTACTGACCGAGTCACACTAGACCCTGATAAAAGCTGAAGAGTGCAGTGCTGATTTCAGGCCAGCGAGGGCCGACAGGACACCGATGATCCAGATCCAGTGACGGACTCCCCGACCGCCTCTTGGCAGGACAGACATCTCCCCCCACTGGAGACACTGGACCACTGAGTCACAGCTCTGTAAAGACTCCCTcacaggactttttttttCTTCTTAAACAGCACCACGGAGTCATGGGTGACCTCGTACTTGGAGAAGAGCTCGTCGGAGGAGGTGATGCCGAACGGGACATCGTCCACAGCCTCCGCAGCCTTCAGGAAGGTTTTGGCATCTTCCGACACCACAtcctgggagagggagacacaggTCACTCAATCACAACAGAACGCCTCCACCTGCCCCATCCCACGCCTCAACTAAAACCCACACCCCTCTCACCTTGAAGAAGCCGATGACGGCAACCTCATTGTCGGTGACAAGCGCCTCGGCCTGGGTGGCCTCGGTCAGGGTGGCGGCAGCAGGGCCAGTGCGCTTCTTCAACCAGGATACGATGTCATCAGCCTGACGCCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU55192 True 580 lncRNA 0.57 2 30551389 30552050

Neighbor

gene id symbol gene type direction distance location
AMCG00013420 NA coding downstream 17510 30523907 ~ 30533879 (-)
AMCG00013419 NA coding downstream 29718 30507951 ~ 30521671 (-)
AMCG00013410 NA coding downstream 114648 30430664 ~ 30436741 (-)
AMCG00013403 NA coding downstream 210928 30333448 ~ 30340461 (-)
AMCG00013404 NA coding downstream 218689 30322265 ~ 30332700 (-)
AMCG00013421 NA coding upstream 71926 30623976 ~ 30635826 (-)
AMCG00013430 LOC104954087 coding upstream 141025 30693075 ~ 30697703 (-)
AMCG00013432 NA coding upstream 146190 30698240 ~ 30700665 (-)
AMCG00013427 mrpl12,LOC106606250 coding upstream 150716 30702766 ~ 30705013 (-)
AMCG00013426 hgs coding upstream 159459 30711509 ~ 30723530 (-)
G44261 NA non-coding downstream 12072 30533971 ~ 30539317 (-)
G44213 NA non-coding downstream 95783 30384686 ~ 30455606 (-)
G44230 NA non-coding downstream 240623 30307026 ~ 30310766 (-)
G44086 NA non-coding downstream 461242 30088803 ~ 30090147 (-)
G43919 NA non-coding downstream 1051816 29497710 ~ 29499573 (-)
G44259 p4hb,LOC107591928 non-coding upstream 1731 30553781 ~ 30599051 (-)
G44330 NA non-coding upstream 220492 30772542 ~ 30774110 (-)
G44381 NA non-coding upstream 373436 30925486 ~ 30931267 (-)
G44382 NA non-coding upstream 379710 30931760 ~ 30935200 (-)
G44384 NA non-coding upstream 385575 30937625 ~ 30937857 (-)
AMCG00013411 anapc11,LOC107553313,LOC106564932 other downstream 65058 30483305 ~ 30486331 (-)
AMCG00013412 NA other downstream 69063 30468630 ~ 30482326 (-)
AMCG00013409 LOC107590438 other downstream 87298 30455727 ~ 30464091 (-)
G44243 NA other downstream 128364 30399887 ~ 30423025 (-)
AMCG00013405 NA other downstream 260522 30286642 ~ 30290867 (-)
AMCG00013425 NA other upstream 178237 30730287 ~ 30742643 (-)
G44719 NA other upstream 2013710 32565760 ~ 32567952 (-)
AMCG00013488 NA other upstream 2070103 32622153 ~ 32627904 (-)
AMCG00013518 NA other upstream 2916799 33468849 ~ 33501747 (-)
G45037 NA other upstream 3126174 33678224 ~ 33678907 (-)

Expression


Co-expression Network