Gene
RNA
| Item | Value |
|---|---|
| gene id | G44323 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 30774182 ~ 30774548 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU55259 | True | 367 | lncRNA | 0.67 | 1 | 30774182 | 30774548 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00013422 | NA | coding | upstream | 1809 | 30770263 ~ 30772373 (+) |
| AMCG00013423 | NA | coding | upstream | 44947 | 30727085 ~ 30729235 (+) |
| AMCG00013424 | NA | coding | upstream | 63103 | 30707785 ~ 30711079 (+) |
| AMCG00013413 | ppp1r27,LOC107087444,LOC101068817,LOC107748880,LOC107558871,LOC108242930,LOC101162449 | coding | upstream | 211620 | 30560481 ~ 30562562 (+) |
| AMCG00013414 | p4hb,LOC107591928 | coding | upstream | 216957 | 30547643 ~ 30557225 (+) |
| AMCG00013437 | NA | coding | downstream | 85176 | 30859724 ~ 30871739 (+) |
| AMCG00013438 | NA | coding | downstream | 118884 | 30893432 ~ 30895656 (+) |
| AMCG00013439 | NA | coding | downstream | 132298 | 30906846 ~ 30907997 (+) |
| AMCG00013440 | NA | coding | downstream | 165532 | 30940080 ~ 30949350 (+) |
| AMCG00013446 | vasp,LOC102786205 | coding | downstream | 210924 | 30985472 ~ 31044736 (+) |
| G44322 | NA | non-coding | upstream | 114 | 30772381 ~ 30774068 (+) |
| G44307 | NA | non-coding | upstream | 36695 | 30736809 ~ 30737487 (+) |
| G44306 | NA | non-coding | upstream | 39387 | 30734536 ~ 30734795 (+) |
| G44182 | NA | non-coding | upstream | 316511 | 30455672 ~ 30457671 (+) |
| G43895 | NA | non-coding | upstream | 1327484 | 29434050 ~ 29446698 (+) |
| G44379 | NA | non-coding | downstream | 148198 | 30922746 ~ 30934437 (+) |
| G44380 | NA | non-coding | downstream | 150188 | 30924736 ~ 30926480 (+) |
| G44383 | NA | non-coding | downstream | 161292 | 30935840 ~ 30936171 (+) |
| G44388 | NA | non-coding | downstream | 192361 | 30966909 ~ 30970500 (+) |
| G44433 | NA | non-coding | downstream | 324802 | 31099350 ~ 31106308 (+) |
| AMCG00013417 | mcrip1,LOC106601427,LOC106606980 | other | upstream | 205963 | 30563240 ~ 30568219 (+) |
| AMCG00013416 | alyref,LOC106606979 | other | upstream | 277569 | 30490827 ~ 30496613 (+) |
| AMCG00013408 | NA | other | upstream | 343533 | 30425007 ~ 30430649 (+) |
| AMCG00013399 | NA | other | upstream | 430177 | 30339802 ~ 30344005 (+) |
| AMCG00013396 | tbc1d16,LOC106597465,LOC106606686 | other | upstream | 545161 | 30218910 ~ 30229021 (+) |
| G44325 | NA | other | downstream | 2303 | 30776851 ~ 30777169 (+) |
| AMCG00013468 | NA | other | downstream | 1126982 | 31901530 ~ 31911801 (+) |
| AMCG00013473 | LOC105911162,LOC105012052,LOC107580644,LOC107566293,LOC107577119,LOC107725066 | other | downstream | 1498720 | 32273268 ~ 32284951 (+) |
| AMCG00013477 | ppp1r37 | other | downstream | 1619270 | 32393818 ~ 32400452 (+) |
| AMCG00013478 | NA | other | downstream | 1648728 | 32423276 ~ 32455686 (+) |
