G44330


Basic Information

Item Value
gene id G44330
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 30772542 ~ 30774110 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU55270
CGGGGCTGGGTGCTGCTCCGGCACAGGCTGTGGACACAGAAGCACCTCCTGGCACACGGCATCGCGTGTAGTAGAGGAgcctctgtttgtttgtttttcctttttgatgATAGAGACTCTTTCAGACATTGAACTGAACCAAAGTCACgatctcctctcctctctctccctccctcaacCCCTTCACCACGCTCCCGCCGTCACGCGATGCCCCTCGCTCGCTCACACCTGCAGCCGATGCCCTGCGTGACATGGGAGCCGCGGTCGTCTTATCTTTTCTgttctattttagtttttcacgTCACTCTGCTGAGCTCTGTGTGTAAAGCAGCGGGGCGAGAGCTCGGACCTGCAGCCCATCACGATCGACTGTCcagttgtctgtttgtgtggGCTAAGtatatgcatgtttgtgtgtgtgtgtgtgtgtgtgtgtgtggataatGGAGAGAGGATGGTGTAGGTGTGTTGAGTGCCCTCCTGCAGTTGTCACATGTCTCTTCCTCGCTCTGCAATGTGCCGGCCTTTGAGTTTACAGCTAATGGGCAGAATTACTGCATTActcgccctctccctctctctctctgggcttcACGTGATGTTCACTCACATCTCTGAGGAAACACTGCAAATCTCCAGTGCAGCTCGACCTGAACATCTTTATAGGTGTGACTCGTACGTGCGGCTCCATTGACCCGGGGACCGGTCCGTGTGTGTGAGTAGTGCTCTCAGCCCACTGCTCGTTTTCACCTTCATTAATTGAATCCTATTTACTTTGTTCCCTGTTGCACCTCTTGGTGTGTGTCTTCGCCCTCCTGTCCAGTGCACTGCAGATCAATTAACTGGATACTTTAAATTTAGAGGGTGTGAGGCCCGAGTATGGTGGGTGGTCTCTCCCGGGACCGGGACGGTTAGCGCAGCTTGGAGGTACCCATCCGTGCCAATGGATGAGAGCAGTTTACCTTAAGATCCTCTCGCTGGCTGGCTGCTCGTGTTTCtgtggttttatgtttttaattgattttaataaccaaaaacCAATTTAAAGGTTTTACGTCTGACTCCTCTGTCCATGCACACAGGGCCCTGGCCAAAAAAACGGAGCAGGTTTTCCACATCCCTGTGCCTGTTATAGAACTGCTCTCGAGCTCTCAGCCACCTCTAAGCTTCCTTTGAAGGGGAGTTTAACCCCCATCACCTTACCTCTCACTCTTGCCTCTTTGCTGTCCCTTCCCAGAGGGATCTGCGCTCTCATAACTGGGTCAGTGTCTACAGTGCAGGATAATAAACAGTGTCCCCTCTCCTGCTGCTGACCTACATCTGCCAGGTAAACAGGAACAGCGGTGCGGCATGCGGCTGTGAAAGTGCCTCCTGTTTGCAGTGCTAATTGTTCTGAGCTAGGAGTGTGAGTTATGGtttatatgcgtgtgtgtgtgcgcttcaGTGTCAAATTACAGGACTAGGGCTGCAGTCCTGTCTGAGTAAGAAGCAGTTTAGAATCGATTGATGTACAATAAAGAGTTGAATATCTTTTCAAGTGAATTTTCATGTATGGTCATAATGTAGGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU55270 True 1569 lncRNA 0.50 1 30772542 30774110

Neighbor

gene id symbol gene type direction distance location
AMCG00013431 NA coding downstream 10972 30760603 ~ 30761570 (-)
AMCG00013428 NA coding downstream 12483 30749783 ~ 30760059 (-)
AMCG00013426 hgs coding downstream 49012 30711509 ~ 30723530 (-)
AMCG00013427 mrpl12,LOC106606250 coding downstream 67529 30702766 ~ 30705013 (-)
AMCG00013432 NA coding downstream 71877 30698240 ~ 30700665 (-)
AMCG00013429 NA coding upstream 172 30774282 ~ 30778472 (-)
AMCG00013434 NA coding upstream 17344 30791454 ~ 30801211 (-)
AMCG00013436 NA coding upstream 29433 30803543 ~ 30808546 (-)
AMCG00013433 NA coding upstream 42499 30816609 ~ 30820190 (-)
AMCG00013435 NA coding upstream 76011 30850121 ~ 30856115 (-)
G44259 p4hb,LOC107591928 non-coding downstream 173491 30553781 ~ 30599051 (-)
G44256 arhgdia,LOC107665665,LOC107654583 non-coding downstream 209851 30540313 ~ 30562691 (-)
G44264 NA non-coding downstream 220492 30551389 ~ 30552050 (-)
G44261 NA non-coding downstream 233225 30533971 ~ 30539317 (-)
G44213 NA non-coding downstream 316936 30384686 ~ 30455606 (-)
G44381 NA non-coding upstream 151376 30925486 ~ 30931267 (-)
G44382 NA non-coding upstream 157650 30931760 ~ 30935200 (-)
G44384 NA non-coding upstream 163515 30937625 ~ 30937857 (-)
G44420 NA non-coding upstream 272615 31046725 ~ 31047119 (-)
G44469 NA non-coding upstream 529419 31303529 ~ 31310495 (-)
AMCG00013425 NA other downstream 29899 30730287 ~ 30742643 (-)
AMCG00013411 anapc11,LOC107553313,LOC106564932 other downstream 286211 30483305 ~ 30486331 (-)
AMCG00013412 NA other downstream 290216 30468630 ~ 30482326 (-)
AMCG00013409 LOC107590438 other downstream 308451 30455727 ~ 30464091 (-)
G44243 NA other downstream 349517 30399887 ~ 30423025 (-)
G44719 NA other upstream 1791650 32565760 ~ 32567952 (-)
AMCG00013488 NA other upstream 1848043 32622153 ~ 32627904 (-)
AMCG00013518 NA other upstream 2694739 33468849 ~ 33501747 (-)
G45037 NA other upstream 2904114 33678224 ~ 33678907 (-)
AMCG00013531 NA other upstream 2918734 33692844 ~ 33699712 (-)

Expression


Co-expression Network