Gene
RNA
| Item | Value |
|---|---|
| gene id | G44380 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 30924736 ~ 30926480 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU55329 | True | 528 | lncRNA | 0.46 | 3 | 30924736 | 30926480 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00013439 | NA | coding | upstream | 16739 | 30906846 ~ 30907997 (+) |
| AMCG00013438 | NA | coding | upstream | 29080 | 30893432 ~ 30895656 (+) |
| AMCG00013437 | NA | coding | upstream | 52997 | 30859724 ~ 30871739 (+) |
| AMCG00013422 | NA | coding | upstream | 152363 | 30770263 ~ 30772373 (+) |
| AMCG00013423 | NA | coding | upstream | 195501 | 30727085 ~ 30729235 (+) |
| AMCG00013440 | NA | coding | downstream | 13600 | 30940080 ~ 30949350 (+) |
| AMCG00013446 | vasp,LOC102786205 | coding | downstream | 58992 | 30985472 ~ 31044736 (+) |
| AMCG00013447 | NA | coding | downstream | 181162 | 31107642 ~ 31131214 (+) |
| AMCG00013451 | NA | coding | downstream | 222693 | 31149173 ~ 31150309 (+) |
| AMCG00013455 | fkrp,LOC107699218,LOC107752280,LOC107566082 | coding | downstream | 430325 | 31356805 ~ 31358367 (+) |
| G44323 | NA | non-coding | upstream | 150188 | 30774182 ~ 30774548 (+) |
| G44322 | NA | non-coding | upstream | 150668 | 30772381 ~ 30774068 (+) |
| G44307 | NA | non-coding | upstream | 187249 | 30736809 ~ 30737487 (+) |
| G44306 | NA | non-coding | upstream | 189941 | 30734536 ~ 30734795 (+) |
| G44182 | NA | non-coding | upstream | 467065 | 30455672 ~ 30457671 (+) |
| G44383 | NA | non-coding | downstream | 9360 | 30935840 ~ 30936171 (+) |
| G44388 | NA | non-coding | downstream | 40429 | 30966909 ~ 30970500 (+) |
| G44433 | NA | non-coding | downstream | 172870 | 31099350 ~ 31106308 (+) |
| G44468 | NA | non-coding | downstream | 377057 | 31303537 ~ 31310491 (+) |
| G44486 | NA | non-coding | downstream | 442727 | 31369207 ~ 31371002 (+) |
| G44325 | NA | other | upstream | 147567 | 30776851 ~ 30777169 (+) |
| AMCG00013417 | mcrip1,LOC106601427,LOC106606980 | other | upstream | 356517 | 30563240 ~ 30568219 (+) |
| AMCG00013416 | alyref,LOC106606979 | other | upstream | 428123 | 30490827 ~ 30496613 (+) |
| AMCG00013408 | NA | other | upstream | 494087 | 30425007 ~ 30430649 (+) |
| AMCG00013399 | NA | other | upstream | 580731 | 30339802 ~ 30344005 (+) |
| AMCG00013468 | NA | other | downstream | 975050 | 31901530 ~ 31911801 (+) |
| AMCG00013473 | LOC105911162,LOC105012052,LOC107580644,LOC107566293,LOC107577119,LOC107725066 | other | downstream | 1346788 | 32273268 ~ 32284951 (+) |
| AMCG00013477 | ppp1r37 | other | downstream | 1467338 | 32393818 ~ 32400452 (+) |
| AMCG00013478 | NA | other | downstream | 1496796 | 32423276 ~ 32455686 (+) |
| G44870 | NA | other | downstream | 2179812 | 33106292 ~ 33106595 (+) |
