G44433


Basic Information

Item Value
gene id G44433
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 31099350 ~ 31106308 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU55394
gaggagcataataagctgaagtgctatctagcagggatagaggactaatattacaagtgctgtcagaagagatgcgtcttgagtaagcgccggaatgaggtcaaggactctgctgttttgacttcggtgggcaggtcgttccaccacttaggggccagggatgagaaggagcggctctggaggaaggagagtggagaggaggcagagttagccttctggcactggaggaacgcagtggtctggaggggatgtatggagagacgagtgactgaaggtagctttatgcagtgtggtcaagacagcagtaggtgagggtcaaagtcttgaactgaatgcgtgctgctatcgggagccagtggagggagcggagcagtggagtagcgtgtgcaaatcgtggcagagagaatatcagacgagccgcagagttctggatgagctggagtgggcgggtagtggatgcaggcaggccggccaggagggagttgcagtagtccaggtgggagaggaccagtgactggacgagtagctgagttgagtagtcggtgagaaagggacggatccggc

Function

NR:

description
PREDICTED: uncharacterized protein LOC109200937 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU55394 True 564 lncRNA 0.55 2 31099350 31106308

Neighbor

gene id symbol gene type direction distance location
AMCG00013446 vasp,LOC102786205 coding upstream 54614 30985472 ~ 31044736 (+)
AMCG00013440 NA coding upstream 150000 30940080 ~ 30949350 (+)
AMCG00013439 NA coding upstream 191353 30906846 ~ 30907997 (+)
AMCG00013438 NA coding upstream 203694 30893432 ~ 30895656 (+)
AMCG00013437 NA coding upstream 227611 30859724 ~ 30871739 (+)
AMCG00013447 NA coding downstream 1334 31107642 ~ 31131214 (+)
AMCG00013451 NA coding downstream 42865 31149173 ~ 31150309 (+)
AMCG00013455 fkrp,LOC107699218,LOC107752280,LOC107566082 coding downstream 250497 31356805 ~ 31358367 (+)
AMCG00013460 NA coding downstream 358386 31464694 ~ 31465848 (+)
AMCG00013459 egln2 coding downstream 378234 31484542 ~ 31491406 (+)
G44388 NA non-coding upstream 128850 30966909 ~ 30970500 (+)
G44383 NA non-coding upstream 163179 30935840 ~ 30936171 (+)
G44379 NA non-coding upstream 164913 30922746 ~ 30934437 (+)
G44380 NA non-coding upstream 172870 30924736 ~ 30926480 (+)
G44323 NA non-coding upstream 324802 30774182 ~ 30774548 (+)
G44468 NA non-coding downstream 197229 31303537 ~ 31310491 (+)
G44486 NA non-coding downstream 262899 31369207 ~ 31371002 (+)
G44529 NA non-coding downstream 541055 31647363 ~ 31665161 (+)
G44549 NA non-coding downstream 678285 31784593 ~ 31871473 (+)
G44561 NA non-coding downstream 792313 31898621 ~ 31899202 (+)
G44325 NA other upstream 322181 30776851 ~ 30777169 (+)
AMCG00013417 mcrip1,LOC106601427,LOC106606980 other upstream 531131 30563240 ~ 30568219 (+)
AMCG00013416 alyref,LOC106606979 other upstream 602737 30490827 ~ 30496613 (+)
AMCG00013408 NA other upstream 668701 30425007 ~ 30430649 (+)
AMCG00013399 NA other upstream 755345 30339802 ~ 30344005 (+)
AMCG00013468 NA other downstream 795222 31901530 ~ 31911801 (+)
AMCG00013473 LOC105911162,LOC105012052,LOC107580644,LOC107566293,LOC107577119,LOC107725066 other downstream 1166960 32273268 ~ 32284951 (+)
AMCG00013477 ppp1r37 other downstream 1287510 32393818 ~ 32400452 (+)
AMCG00013478 NA other downstream 1316968 32423276 ~ 32455686 (+)
G44870 NA other downstream 1999984 33106292 ~ 33106595 (+)

Expression


Co-expression Network