Gene
RNA
| Item | Value |
|---|---|
| gene id | G44581 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 32030256 ~ 32030922 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0031290 | retinal ganglion cell axon guidance | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU55573 | True | 667 | lncRNA | 0.39 | 1 | 32030256 | 32030922 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00013472 | NA | coding | upstream | 40080 | 31988690 ~ 31990176 (+) |
| AMCG00013469 | NA | coding | upstream | 108881 | 31915101 ~ 31921375 (+) |
| AMCG00013465 | NA | coding | upstream | 257063 | 31772421 ~ 31773193 (+) |
| AMCG00013462 | ap2s1 | coding | upstream | 276848 | 31742807 ~ 31753408 (+) |
| AMCG00013461 | NA | coding | upstream | 388944 | 31616924 ~ 31641312 (+) |
| AMCG00013474 | NA | coding | downstream | 195249 | 32226171 ~ 32226557 (+) |
| AMCG00013479 | LOC107735004,LOC107735469 | coding | downstream | 315216 | 32346138 ~ 32389962 (+) |
| AMCG00013476 | NA | coding | downstream | 433174 | 32464096 ~ 32475750 (+) |
| AMCG00013481 | NA | coding | downstream | 459149 | 32490071 ~ 32494429 (+) |
| AMCG00013485 | NA | coding | downstream | 558806 | 32589728 ~ 32599218 (+) |
| G44561 | NA | non-coding | upstream | 131054 | 31898621 ~ 31899202 (+) |
| G44549 | NA | non-coding | upstream | 158783 | 31784593 ~ 31871473 (+) |
| G44529 | NA | non-coding | upstream | 365095 | 31647363 ~ 31665161 (+) |
| G44486 | NA | non-coding | upstream | 659254 | 31369207 ~ 31371002 (+) |
| G44468 | NA | non-coding | upstream | 719765 | 31303537 ~ 31310491 (+) |
| G44590 | calm1,LOC102778633,LOC107670363 | non-coding | downstream | 22811 | 32053733 ~ 32057626 (+) |
| G44598 | NA | non-coding | downstream | 105308 | 32136230 ~ 32138577 (+) |
| G44613 | NA | non-coding | downstream | 160257 | 32191179 ~ 32191395 (+) |
| G44620 | NA | non-coding | downstream | 255092 | 32286014 ~ 32286159 (+) |
| G44702 | NA | non-coding | downstream | 511713 | 32542635 ~ 32543676 (+) |
| AMCG00013468 | NA | other | upstream | 118455 | 31901530 ~ 31911801 (+) |
| G44325 | NA | other | upstream | 1253087 | 30776851 ~ 30777169 (+) |
| AMCG00013417 | mcrip1,LOC106601427,LOC106606980 | other | upstream | 1462037 | 30563240 ~ 30568219 (+) |
| AMCG00013416 | alyref,LOC106606979 | other | upstream | 1533643 | 30490827 ~ 30496613 (+) |
| AMCG00013408 | NA | other | upstream | 1599607 | 30425007 ~ 30430649 (+) |
| AMCG00013473 | LOC105911162,LOC105012052,LOC107580644,LOC107566293,LOC107577119,LOC107725066 | other | downstream | 242346 | 32273268 ~ 32284951 (+) |
| AMCG00013477 | ppp1r37 | other | downstream | 362896 | 32393818 ~ 32400452 (+) |
| AMCG00013478 | NA | other | downstream | 392354 | 32423276 ~ 32455686 (+) |
| G44870 | NA | other | downstream | 1075370 | 33106292 ~ 33106595 (+) |
| AMCG00013515 | dpf1,LOC107561370,LOC107749650,LOC107672425,LOC102781105 | other | downstream | 1345598 | 33376520 ~ 33412841 (+) |
