G44613


Basic Information

Item Value
gene id G44613
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 32191179 ~ 32191395 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU55609
ccgtcctgggcctgctcctgttctcactctacactcgctccctgggccccctcatcacttcccatggcttctcctaccacttctatgctgatgatgcccagatcttcctgtcttttccctcttctgaccctctcatcccctcacgcatctcttcctgcttgtctgccatttccacctggatgcactcgcaccacctcaagctcaacctctccaaatc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU55609 True 217 lncRNA 0.56 1 32191179 32191395

Neighbor

gene id symbol gene type direction distance location
AMCG00013472 NA coding upstream 201003 31988690 ~ 31990176 (+)
AMCG00013469 NA coding upstream 269804 31915101 ~ 31921375 (+)
AMCG00013465 NA coding upstream 417986 31772421 ~ 31773193 (+)
AMCG00013462 ap2s1 coding upstream 437771 31742807 ~ 31753408 (+)
AMCG00013461 NA coding upstream 549867 31616924 ~ 31641312 (+)
AMCG00013474 NA coding downstream 34776 32226171 ~ 32226557 (+)
AMCG00013479 LOC107735004,LOC107735469 coding downstream 154743 32346138 ~ 32389962 (+)
AMCG00013476 NA coding downstream 272701 32464096 ~ 32475750 (+)
AMCG00013481 NA coding downstream 298676 32490071 ~ 32494429 (+)
AMCG00013485 NA coding downstream 398333 32589728 ~ 32599218 (+)
G44598 NA non-coding upstream 52602 32136230 ~ 32138577 (+)
G44590 calm1,LOC102778633,LOC107670363 non-coding upstream 133553 32053733 ~ 32057626 (+)
G44581 NA non-coding upstream 160257 32030256 ~ 32030922 (+)
G44561 NA non-coding upstream 291977 31898621 ~ 31899202 (+)
G44549 NA non-coding upstream 319706 31784593 ~ 31871473 (+)
G44620 NA non-coding downstream 94619 32286014 ~ 32286159 (+)
G44702 NA non-coding downstream 351240 32542635 ~ 32543676 (+)
G44747 NA non-coding downstream 464108 32655503 ~ 32655702 (+)
G44769 NA non-coding downstream 565343 32756738 ~ 32758380 (+)
G44790 NA non-coding downstream 645920 32837315 ~ 32837843 (+)
AMCG00013468 NA other upstream 279378 31901530 ~ 31911801 (+)
G44325 NA other upstream 1414010 30776851 ~ 30777169 (+)
AMCG00013417 mcrip1,LOC106601427,LOC106606980 other upstream 1622960 30563240 ~ 30568219 (+)
AMCG00013416 alyref,LOC106606979 other upstream 1694566 30490827 ~ 30496613 (+)
AMCG00013408 NA other upstream 1760530 30425007 ~ 30430649 (+)
AMCG00013473 LOC105911162,LOC105012052,LOC107580644,LOC107566293,LOC107577119,LOC107725066 other downstream 81873 32273268 ~ 32284951 (+)
AMCG00013477 ppp1r37 other downstream 202423 32393818 ~ 32400452 (+)
AMCG00013478 NA other downstream 231881 32423276 ~ 32455686 (+)
G44870 NA other downstream 914897 33106292 ~ 33106595 (+)
AMCG00013515 dpf1,LOC107561370,LOC107749650,LOC107672425,LOC102781105 other downstream 1185125 33376520 ~ 33412841 (+)

Expression


Co-expression Network