G44620


Basic Information

Item Value
gene id G44620
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 32286014 ~ 32286159 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU55623
ACTGACTTTTATCTACTTGATCTAAGACTGgggaatatgtgtgtttgtgtgcatgttgtgtgtttatgtgtgattTGATTGTGTAGGATTAATGTCTGCATCTGCCAGTTATGGAAAATATAAAAGTCATCTTCATGTGTATTTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU55623 True 146 lncRNA 0.34 1 32286014 32286159

Neighbor

gene id symbol gene type direction distance location
AMCG00013474 NA coding upstream 59457 32226171 ~ 32226557 (+)
AMCG00013472 NA coding upstream 295838 31988690 ~ 31990176 (+)
AMCG00013469 NA coding upstream 364639 31915101 ~ 31921375 (+)
AMCG00013465 NA coding upstream 512821 31772421 ~ 31773193 (+)
AMCG00013462 ap2s1 coding upstream 532606 31742807 ~ 31753408 (+)
AMCG00013479 LOC107735004,LOC107735469 coding downstream 59979 32346138 ~ 32389962 (+)
AMCG00013476 NA coding downstream 177937 32464096 ~ 32475750 (+)
AMCG00013481 NA coding downstream 203912 32490071 ~ 32494429 (+)
AMCG00013485 NA coding downstream 303569 32589728 ~ 32599218 (+)
AMCG00013487 NA coding downstream 318576 32604735 ~ 32608797 (+)
G44613 NA non-coding upstream 94619 32191179 ~ 32191395 (+)
G44598 NA non-coding upstream 147437 32136230 ~ 32138577 (+)
G44590 calm1,LOC102778633,LOC107670363 non-coding upstream 228388 32053733 ~ 32057626 (+)
G44581 NA non-coding upstream 255092 32030256 ~ 32030922 (+)
G44561 NA non-coding upstream 386812 31898621 ~ 31899202 (+)
G44702 NA non-coding downstream 256476 32542635 ~ 32543676 (+)
G44747 NA non-coding downstream 369344 32655503 ~ 32655702 (+)
G44769 NA non-coding downstream 470579 32756738 ~ 32758380 (+)
G44790 NA non-coding downstream 551156 32837315 ~ 32837843 (+)
G44860 NA non-coding downstream 797569 33083728 ~ 33088760 (+)
AMCG00013473 LOC105911162,LOC105012052,LOC107580644,LOC107566293,LOC107577119,LOC107725066 other upstream 1063 32273268 ~ 32284951 (+)
AMCG00013468 NA other upstream 374213 31901530 ~ 31911801 (+)
G44325 NA other upstream 1508845 30776851 ~ 30777169 (+)
AMCG00013417 mcrip1,LOC106601427,LOC106606980 other upstream 1717795 30563240 ~ 30568219 (+)
AMCG00013416 alyref,LOC106606979 other upstream 1789401 30490827 ~ 30496613 (+)
AMCG00013477 ppp1r37 other downstream 107659 32393818 ~ 32400452 (+)
AMCG00013478 NA other downstream 137117 32423276 ~ 32455686 (+)
G44870 NA other downstream 820133 33106292 ~ 33106595 (+)
AMCG00013515 dpf1,LOC107561370,LOC107749650,LOC107672425,LOC102781105 other downstream 1090361 33376520 ~ 33412841 (+)
AMCG00013516 NA other downstream 1156235 33442394 ~ 33449093 (+)

Expression


Co-expression Network