G44747


Basic Information

Item Value
gene id G44747
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 32655503 ~ 32655702 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU55784
gaactgaaccttttcaccctggaacagaggagacgacgtggggacttgatccaagtcttcaaaatcatgaagggaatcgaccacatcaaaccagaggagcttttccagatcagcagggacacacgcacccggggacacaaatggaaattgggcttcaaggcattcaaaacggaaaacaggagacacttcttcacacagag

Function

NR:

description
PREDICTED: 26S proteasome non-ATPase regulatory subunit 1 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU55784 True 200 lncRNA 0.49 1 32655503 32655702

Neighbor

gene id symbol gene type direction distance location
AMCG00013486 NA coding upstream 19239 32628927 ~ 32636264 (+)
AMCG00013487 NA coding upstream 46706 32604735 ~ 32608797 (+)
AMCG00013485 NA coding upstream 56285 32589728 ~ 32599218 (+)
AMCG00013481 NA coding upstream 161074 32490071 ~ 32494429 (+)
AMCG00013476 NA coding upstream 179753 32464096 ~ 32475750 (+)
AMCG00013491 akt2 coding downstream 37472 32693174 ~ 32711904 (+)
AMCG00013492 NA coding downstream 58722 32714424 ~ 32724784 (+)
AMCG00013493 NA coding downstream 97070 32752772 ~ 32756003 (+)
AMCG00013495 itpkc,LOC102792490,LOC102297313 coding downstream 146547 32802249 ~ 32829019 (+)
AMCG00013494 snrpa coding downstream 182483 32838185 ~ 32843351 (+)
G44702 NA non-coding upstream 111827 32542635 ~ 32543676 (+)
G44620 NA non-coding upstream 369344 32286014 ~ 32286159 (+)
G44613 NA non-coding upstream 464108 32191179 ~ 32191395 (+)
G44598 NA non-coding upstream 516926 32136230 ~ 32138577 (+)
G44590 calm1,LOC102778633,LOC107670363 non-coding upstream 597877 32053733 ~ 32057626 (+)
G44769 NA non-coding downstream 101036 32756738 ~ 32758380 (+)
G44790 NA non-coding downstream 181613 32837315 ~ 32837843 (+)
G44860 NA non-coding downstream 428026 33083728 ~ 33088760 (+)
G44861 NA non-coding downstream 433114 33088816 ~ 33090427 (+)
G44865 NA non-coding downstream 438600 33094302 ~ 33095508 (+)
AMCG00013478 NA other upstream 199817 32423276 ~ 32455686 (+)
AMCG00013477 ppp1r37 other upstream 255051 32393818 ~ 32400452 (+)
AMCG00013473 LOC105911162,LOC105012052,LOC107580644,LOC107566293,LOC107577119,LOC107725066 other upstream 370552 32273268 ~ 32284951 (+)
AMCG00013468 NA other upstream 743702 31901530 ~ 31911801 (+)
G44325 NA other upstream 1878334 30776851 ~ 30777169 (+)
G44870 NA other downstream 450590 33106292 ~ 33106595 (+)
AMCG00013515 dpf1,LOC107561370,LOC107749650,LOC107672425,LOC102781105 other downstream 720818 33376520 ~ 33412841 (+)
AMCG00013516 NA other downstream 786692 33442394 ~ 33449093 (+)
G45029 NA other downstream 1039890 33695592 ~ 33699545 (+)
G45072 NA other downstream 1458971 34114673 ~ 34114939 (+)

Expression


Co-expression Network