G44749 (LOC105030512,LOC106609167,LOC106584099)


Basic Information

Item Value
gene id G44749
gene name LOC105030512,LOC106609167,LOC106584099
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 32656705 ~ 32657232 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU55786
tcacacTCCGATACAACAGGTCCCAGActtgctcaatgggattgagatccgggctcttcgctggccgtggcagaacactgacattcctgtcttgcaggataTTCACGTCCAGCGAAGATGGGTTTGTGCCTATGCTGTGTttttgccggtgatgtctggtaaggacctgccttacaacaggtctacaagccctcagtccagcctctctcagcctattgcggacagtctggattgtgcgttcctggggtaactcgggcagttgttgttgccatcctgtacctgtcccgcaggtgtgatattcggatgtaccgatcctgtgcaggtgttgttacacgtggtctgccactgtgaggacgatcagctgtccttcctttctccctgtagcgctgtcttaggcgtctcacagtacggacattgcaatttattgccctggccacatctgcagtcctcatgcctccttgcagcatgcctaaggcacgttcacacagaggagcagggaccctgggcatctttcttttggtgtttttc

Function

NR:

description
PREDICTED: uncharacterized protein LOC105030512

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU55786 True 528 lncRNA 0.53 1 32656705 32657232

Neighbor

gene id symbol gene type direction distance location
AMCG00013489 NA coding downstream 35767 32609881 ~ 32620938 (-)
AMCG00013483 NA coding downstream 75402 32572426 ~ 32581303 (-)
AMCG00013484 clptm1,LOC107582636 coding downstream 91351 32545177 ~ 32565354 (-)
AMCG00013482 NA coding downstream 116879 32521650 ~ 32539826 (-)
AMCG00013480 NA coding downstream 244837 32408373 ~ 32411868 (-)
AMCG00013496 NA coding upstream 176615 32833847 ~ 32836598 (-)
AMCG00013507 NA coding upstream 439407 33096639 ~ 33108496 (-)
AMCG00013508 map3k10,LOC102787573,LOC107756783 coding upstream 464740 33121972 ~ 33122871 (-)
AMCG00013506 NA coding upstream 472822 33130054 ~ 33143388 (-)
AMCG00013511 NA coding upstream 588932 33246164 ~ 33263876 (-)
G44748 NA non-coding downstream 980 32655525 ~ 32655725 (-)
G44703 NA non-coding downstream 113028 32542648 ~ 32543677 (-)
G44668 NA non-coding downstream 215334 32433288 ~ 32441371 (-)
G44651 NA non-coding downstream 272775 32316180 ~ 32383930 (-)
G44623 NA non-coding downstream 370727 32285055 ~ 32285978 (-)
G44777 NA non-coding upstream 99532 32756764 ~ 32758330 (-)
G44803 NA non-coding upstream 196024 32853256 ~ 32853765 (-)
G44815 clasrp,LOC102789808 non-coding upstream 276835 32934067 ~ 32938173 (-)
G44848 NA non-coding upstream 371035 33028267 ~ 33031255 (-)
G44862 NA non-coding upstream 399421 33056653 ~ 33056863 (-)
AMCG00013488 NA other downstream 28801 32622153 ~ 32627904 (-)
G44719 NA other downstream 88753 32565760 ~ 32567952 (-)
AMCG00013425 NA other downstream 1914062 30730287 ~ 30742643 (-)
AMCG00013411 anapc11,LOC107553313,LOC106564932 other downstream 2170374 30483305 ~ 30486331 (-)
AMCG00013412 NA other downstream 2174379 30468630 ~ 30482326 (-)
AMCG00013518 NA other upstream 811617 33468849 ~ 33501747 (-)
G45037 NA other upstream 1020992 33678224 ~ 33678907 (-)
AMCG00013531 NA other upstream 1035612 33692844 ~ 33699712 (-)
AMCG00013578 NA other upstream 4221961 36879193 ~ 36885493 (-)
G45468 NA other upstream 4301945 36959177 ~ 36959914 (-)

Expression


Co-expression Network