G44769


Basic Information

Item Value
gene id G44769
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 32756738 ~ 32758380 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU55810
atgtttttatttatgtttttatttttatttttgtattgttgtagttgttggtttatgtttgtttattttccagttttaacaacaacaaagaaaaaactaagagGAAGATGCCAGAGCTGAGAATAAgatggggagagacagagacagagacaggcagtgTGAAACGGTGGTCAGAGCTTAGTGACCGAGAGACAGTGAGGTAAGGGACCAGATCGGCCTTGTGACCCTGAGCTGACGTTAAAAGTACTATAAACCTGGACAGGAGTAATTGACTGGGGAGGCCTTATAATAAAGCAGTCAAAAGTATGACCAGTGCAGAAGTGGCTTGAGGATTGGTATAAATCTGATATAGTACTGTTCTGAGGGTACAGATAATCGTTTTGTGGTGACCATGCTGTTTTTGCCTGTTGAGACAGGTCAGTCTCTGATTCGAGCATCCTGTAGTGGCACTCAACTTCAGCCACGTggcagaaacacatttttcacctCCTGTGAAGTACAGGCCTACATACTAGTTCTTGTGTTGATTTTGCAGAGTATGGTAATGTGCTTCTCATTTAGAGAGTTGTAACACAAGTACTCTCTGAAGCCACTGTGCATAGCGGACATACACAACATAGAAGCCACAAAATAGCAATTTTGCttagtgtgtgttgtgtgtccaGAGTTTTTATGGTTTGCGCAATGGGTAATACTGAAGCAAGTGTAGAGTATAAATACTTTCCGAGTGTATgcgtgagtgcatgtgtgtatccTACTCATCACATTCAGACAGATGGAAGATTTTTCTGTGCCATTTCTAGCACACAGAGACAAGAGCTGGTCTCTCTCGACTCTTACTGATTCATGGTTTCAgctcatcccagaggtgttctatggcATTGCAGTCTAGACTCTCCAAAATTCTCTCCCAGATTCTTGTTGAATCGCTGAGTTCGAGCTTTGTGACTGCAATATGTTGAAACTTCTTTCAGTGCTGTCCAAAATGCCACAGAATAATCACAGCCCAGAAAAAAGGTCTCTACATAGTATTTGACCCCTGATAGAATCTGTTACTGGAAAAAGGGAAGCTTGAGCCTTTGCCTTTGGTTATAaactttgtttgtatttatgtgtggATGTGCGCGTCATACAGTGTGAATTAAGTTTATGCTTATGAAATCAGTTGGCCCATGATAACTGAATTCTAAATACAGAACAGTTCACTGTGAAACAATGAAtgatatttgaaatacaatacagatgAGATCAATGGGAATATGCTGACCTGGACAGTGACCGTGCGCACCAGAGGGCAACTCTGCGTGACCACCATTAGAGTCAGTGATTGTTCACCTTTGGAAAGACTTGGTTATATAGCAGTATGTGCATCGCATAAGTAAGATCCTTCACTAGCGGGGCTCAGACTTGCTATTATACTGTTTATGAATCTTTGTGCTACACTGTATAATGTAATCTTTTGCATcgtattctgtatttttgttaaacCAACCTATGACTTTGCCATGTAACCTTCTGCAGTTATTTCACATTGGCcaactcatttttttttttttttttctgtgagaaAGTTTGGAATTAAAGCAGGCGGGCCCatgcaagaaaatataacaTGGGGGTGTTTCATACAATTTCATTCCCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU55810 True 1643 lncRNA 0.40 1 32756738 32758380

Neighbor

gene id symbol gene type direction distance location
AMCG00013493 NA coding upstream 735 32752772 ~ 32756003 (+)
AMCG00013492 NA coding upstream 31954 32714424 ~ 32724784 (+)
AMCG00013491 akt2 coding upstream 44834 32693174 ~ 32711904 (+)
AMCG00013490 NA coding upstream 100584 32642445 ~ 32656154 (+)
AMCG00013486 NA coding upstream 120474 32628927 ~ 32636264 (+)
AMCG00013495 itpkc,LOC102792490,LOC102297313 coding downstream 43869 32802249 ~ 32829019 (+)
AMCG00013494 snrpa coding downstream 79805 32838185 ~ 32843351 (+)
AMCG00013497 NA coding downstream 95246 32853626 ~ 32876130 (+)
AMCG00013500 NA coding downstream 129774 32888154 ~ 32917516 (+)
AMCG00013498 clasrp coding downstream 169436 32927816 ~ 32947713 (+)
G44747 NA non-coding upstream 101036 32655503 ~ 32655702 (+)
G44702 NA non-coding upstream 213062 32542635 ~ 32543676 (+)
G44620 NA non-coding upstream 470579 32286014 ~ 32286159 (+)
G44613 NA non-coding upstream 565343 32191179 ~ 32191395 (+)
G44598 NA non-coding upstream 618161 32136230 ~ 32138577 (+)
G44790 NA non-coding downstream 78935 32837315 ~ 32837843 (+)
G44860 NA non-coding downstream 325348 33083728 ~ 33088760 (+)
G44861 NA non-coding downstream 330436 33088816 ~ 33090427 (+)
G44865 NA non-coding downstream 335922 33094302 ~ 33095508 (+)
G44867 NA non-coding downstream 342094 33100474 ~ 33100687 (+)
AMCG00013478 NA other upstream 301052 32423276 ~ 32455686 (+)
AMCG00013477 ppp1r37 other upstream 356286 32393818 ~ 32400452 (+)
AMCG00013473 LOC105911162,LOC105012052,LOC107580644,LOC107566293,LOC107577119,LOC107725066 other upstream 471787 32273268 ~ 32284951 (+)
AMCG00013468 NA other upstream 844937 31901530 ~ 31911801 (+)
G44325 NA other upstream 1979569 30776851 ~ 30777169 (+)
G44870 NA other downstream 347912 33106292 ~ 33106595 (+)
AMCG00013515 dpf1,LOC107561370,LOC107749650,LOC107672425,LOC102781105 other downstream 618140 33376520 ~ 33412841 (+)
AMCG00013516 NA other downstream 684014 33442394 ~ 33449093 (+)
G45029 NA other downstream 937212 33695592 ~ 33699545 (+)
G45072 NA other downstream 1356293 34114673 ~ 34114939 (+)

Expression


Co-expression Network