G44777


Basic Information

Item Value
gene id G44777
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 32756764 ~ 32758330 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU55818
GCCCGCCTGCTTTAATTCCAAACTttctcacagaaaaaaaaaaaaaaaaatgagttgGCCAATGTGAAATAACTGCAGAAGGTTACATGGCAAAGTCATAGGTTGgtttaacaaaaatacagaatacgATGCAAAAGATTACATTATACAGTGTAGCACAAAGATTCATAAACAGTATAATAGCAAGTCTGAGCCCCGCTAGTGAAGGATCTTACTTATGCGATGCACATACTGCTATATAACCAAGTCTTTCCAAAGGTGAACAATCACTGACTCTAATGGTGGTCACGCAGAGTTGCCCTCTGGTGCGCACGGTCACTGTCCAGGTCAGCATATTCCCATTGATCTcatctgtattgtatttcaaatatcaTTCATTGTTTCACAGTGAACTGTTCTGTATTTAGAATTCAGTTATCATGGGCCAACTGATTTCATAAGCATAAACTTAATTCACACTGTATGACGCGCACATccacacataaatacaaacaaagttTATAACCAAAGGCAAAGGCTCAAGCTTCCCTTTTTCCAGTAACAGATTCTATCAGGGGTCAAATACTATGTAGAGACCTTTTTTCTGGGCTGTGATTATTCTGTGGCATTTTGGACAGCACTGAAAGAAGTTTCAACATATTGCAGTCACAAAGCTCGAACTCAGCGATTCAACAAGAATCTGGGAGAGAATTTTGGAGAGTCTAGACTGCAATgccatagaacacctctgggatgagcTGAAACCATGAATCAGTAAGAGTCGAGAGAGACCAGCTCTTGTCTCTGTGTGCTAGAAATGGCACAGAAAAATCTTCCATCTGTCTGAATGTGATGAGTAggatacacacatgcactcacgcATACACTCGGAAAGTATTTATACTCTACACTTGCTTCAGTATTACCCATTGCGCAAACCATAAAAACTCtggacacacaacacacactaaGCAAAATTGCTATTTTGTGGCTTCTATGTTGTGTATGTCCGCTATGCACAGTGGCTTCAGAGAGTACTTGTGTTACAACTCTCTAAATGAGAAGCACATTACCATACTCTGCAAAATCAACACAAGAACTAGTATGTAGGCCTGTACTTCACAGGaggtgaaaaatgtgtttctgccACGTGGCTGAAGTTGAGTGCCACTACAGGATGCTCGAATCAGAGACTGACCTGTCTCAACAGGCAAAAACAGCATGGTCACCACAAAACGATTATCTGTACCCTCAGAACAGTACTATATCAGATTTATACCAATCCTCAAGCCACTTCTGCACTGGTCATACTTTTGACTGCTTTATTATAAGGCCTCCCCAGTCAATTACTCCTGTCCAGGTTTATAGTACTTTTAACGTCAGCTCAGGGTCACAAGGCCGATCTGGTCCCTTACCTCACTGTCTCTCGGTCACTAAGCTCTGACCACCGTTTCAcactgcctgtctctgtctctgtctctccccatcTTATTCTCAGCTCTGGCATCTTCctcttagttttttctttgttgttgttaaaactggaaaataaacaaacataaaccaacaactacaacaatacaaaaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU55818 True 1567 lncRNA 0.41 1 32756764 32758330

Neighbor

gene id symbol gene type direction distance location
AMCG00013489 NA coding downstream 135826 32609881 ~ 32620938 (-)
AMCG00013483 NA coding downstream 175461 32572426 ~ 32581303 (-)
AMCG00013484 clptm1,LOC107582636 coding downstream 191410 32545177 ~ 32565354 (-)
AMCG00013482 NA coding downstream 216938 32521650 ~ 32539826 (-)
AMCG00013480 NA coding downstream 344896 32408373 ~ 32411868 (-)
AMCG00013496 NA coding upstream 75517 32833847 ~ 32836598 (-)
AMCG00013507 NA coding upstream 338309 33096639 ~ 33108496 (-)
AMCG00013508 map3k10,LOC102787573,LOC107756783 coding upstream 363642 33121972 ~ 33122871 (-)
AMCG00013506 NA coding upstream 371724 33130054 ~ 33143388 (-)
AMCG00013511 NA coding upstream 487834 33246164 ~ 33263876 (-)
G44749 LOC105030512,LOC106609167,LOC106584099 non-coding downstream 99532 32656705 ~ 32657232 (-)
G44748 NA non-coding downstream 101039 32655525 ~ 32655725 (-)
G44703 NA non-coding downstream 213087 32542648 ~ 32543677 (-)
G44668 NA non-coding downstream 315393 32433288 ~ 32441371 (-)
G44651 NA non-coding downstream 372834 32316180 ~ 32383930 (-)
G44803 NA non-coding upstream 94926 32853256 ~ 32853765 (-)
G44815 clasrp,LOC102789808 non-coding upstream 175737 32934067 ~ 32938173 (-)
G44848 NA non-coding upstream 269937 33028267 ~ 33031255 (-)
G44862 NA non-coding upstream 298323 33056653 ~ 33056863 (-)
G44864 NA non-coding upstream 330572 33088902 ~ 33090447 (-)
AMCG00013488 NA other downstream 128860 32622153 ~ 32627904 (-)
G44719 NA other downstream 188812 32565760 ~ 32567952 (-)
AMCG00013425 NA other downstream 2014121 30730287 ~ 30742643 (-)
AMCG00013411 anapc11,LOC107553313,LOC106564932 other downstream 2270433 30483305 ~ 30486331 (-)
AMCG00013412 NA other downstream 2274438 30468630 ~ 30482326 (-)
AMCG00013518 NA other upstream 710519 33468849 ~ 33501747 (-)
G45037 NA other upstream 919894 33678224 ~ 33678907 (-)
AMCG00013531 NA other upstream 934514 33692844 ~ 33699712 (-)
AMCG00013578 NA other upstream 4120863 36879193 ~ 36885493 (-)
G45468 NA other upstream 4200847 36959177 ~ 36959914 (-)

Expression


Co-expression Network