G44790


Basic Information

Item Value
gene id G44790
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 32837315 ~ 32837843 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU55832
GGACACGTTTCAATTGTATTGATTACTATACTTATTTTAGTACAATAcgctgaaatgtttgttttgaaacaaatcctgcaaaaagcaaaaaactaaacacatacCCATAGTTGTATGTTGCTAACGAAACACGCTCAGTCGTAACTTCCATAAAAGGATATCTAAGTGTGCCgtcaaaaaatacatcaaaattaatatttgtgttgttttctcctGCAGTGTAATAATATTCAAAGCAAGCTTAGCGacaatcaaaacataattaaactgtTTCGAGAAAACACGATTATTTCGCGGGGTGCACTGTTATTTACAGTACTGAAGGCGACAAAAGTGTAAAGAACTATAGGCCTATCAAAATATTATTCAATGTATATACTGCAATTATTTGTTACGTTGAAAGACTGTATATATAAGGTACGTtcgaaataaatacaaaactaccTAAAGGATAGTTTAACAGTTCAAAATAGACCAGGAAATACTATGTTCCTGTCGGGGATATTTTACTGTAACAAACTAAACGTTC

Function

NR:

description
hypothetical protein cypCar_00009845

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU55832 True 529 lncRNA 0.32 1 32837315 32837843

Neighbor

gene id symbol gene type direction distance location
AMCG00013495 itpkc,LOC102792490,LOC102297313 coding upstream 8296 32802249 ~ 32829019 (+)
AMCG00013493 NA coding upstream 81312 32752772 ~ 32756003 (+)
AMCG00013492 NA coding upstream 112531 32714424 ~ 32724784 (+)
AMCG00013491 akt2 coding upstream 125411 32693174 ~ 32711904 (+)
AMCG00013490 NA coding upstream 181161 32642445 ~ 32656154 (+)
AMCG00013494 snrpa coding downstream 342 32838185 ~ 32843351 (+)
AMCG00013497 NA coding downstream 15783 32853626 ~ 32876130 (+)
AMCG00013500 NA coding downstream 50311 32888154 ~ 32917516 (+)
AMCG00013498 clasrp coding downstream 89973 32927816 ~ 32947713 (+)
AMCG00013499 NA coding downstream 113472 32951315 ~ 32963942 (+)
G44769 NA non-coding upstream 78935 32756738 ~ 32758380 (+)
G44747 NA non-coding upstream 181613 32655503 ~ 32655702 (+)
G44702 NA non-coding upstream 293639 32542635 ~ 32543676 (+)
G44620 NA non-coding upstream 551156 32286014 ~ 32286159 (+)
G44613 NA non-coding upstream 645920 32191179 ~ 32191395 (+)
G44860 NA non-coding downstream 245885 33083728 ~ 33088760 (+)
G44861 NA non-coding downstream 250973 33088816 ~ 33090427 (+)
G44865 NA non-coding downstream 256459 33094302 ~ 33095508 (+)
G44867 NA non-coding downstream 262631 33100474 ~ 33100687 (+)
G44868 map3k10,LOC107554498,LOC107560156 non-coding downstream 264796 33102639 ~ 33102873 (+)
AMCG00013478 NA other upstream 381629 32423276 ~ 32455686 (+)
AMCG00013477 ppp1r37 other upstream 436863 32393818 ~ 32400452 (+)
AMCG00013473 LOC105911162,LOC105012052,LOC107580644,LOC107566293,LOC107577119,LOC107725066 other upstream 552364 32273268 ~ 32284951 (+)
AMCG00013468 NA other upstream 925514 31901530 ~ 31911801 (+)
G44325 NA other upstream 2060146 30776851 ~ 30777169 (+)
G44870 NA other downstream 268449 33106292 ~ 33106595 (+)
AMCG00013515 dpf1,LOC107561370,LOC107749650,LOC107672425,LOC102781105 other downstream 538677 33376520 ~ 33412841 (+)
AMCG00013516 NA other downstream 604551 33442394 ~ 33449093 (+)
G45029 NA other downstream 857749 33695592 ~ 33699545 (+)
G45072 NA other downstream 1276830 34114673 ~ 34114939 (+)

Expression


Co-expression Network