G44865


Basic Information

Item Value
gene id G44865
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 33094302 ~ 33095508 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU55928
ttatttatatgatttattttcccgacatcataatttaaattaacaactcattaattaaaatcagtcaacttttttcttttcctctcagTATATCTACAAATATGTACAAAGACCCCCGGGTGTGGAGGGGATGGTCGGCTAATAAATAAACTGGGTGCTCACAACCTCTTGATAGGAGCTGGTGATGGAAACAGTCTGTGGGTATCTTCCTTCAGGCCGTGCTATTTCAACACGTCCCATACAAATGGAGaagagcagatttatttttttgctagTCTTTTCTTTTGGAGGGCCACCAAAATGCCTCTCGTTGACGGTATATTTTTCACTACCTTGAAAAAGAGAACATGGCAGTCACCTCCATAGTCTTTTGAGTCAAAAACCAGGGAATGCACAGTCACTGACTCTCCACACTCGCTTCTCATACAGACACAGTGACTCCATTCACCGGGGCTGAGGCATCCCTCAGCCCCCCCTGCTGCTTTGCTCTGGTCCATGTTATCTACCAATGGAAAACGTGCGTGTTTCCGGTCCCCGCCCACGCCTGGAATCACCACCaggttaaataataaataattcaataaataaataaatacagatcaaGACTCTAATCAAGAGGTCACtgtttcatcttttttttctctccttcgaAAGTGGCCGCAGAGATATCGGCCATGCAGTTAACAACTCCCCAGCCCCCCCCTTCCACACTCTTATTTTTGGACTGTGTTTCTGCCGCTCTTTCTCTGCCCTCTGCAGGACTTACAGTCCGGGCACTTCTTCTTGGTTCTTGCCTGACTGATTGCAGTTGTGTGGTCTCCTCCACAGATTTCCCTATAAGGGAGAATAGTCCTGACCCCTGCTACAGCCGTCTGCTTTTGTCGTTGTTTGTTTGTCACCTTGTTTTTAGACAGTATAGACAGAGAAATCTCTTGAAACACCCAGAAGGAGCTCTctactgtttgtgtgtgtgtgtgtataggtaATGGGCAGAATGGATAAGATTCGGAAAGGTCATGCTGTTTTATACATTCCCCCAGCCCCAGTCCCCGAGAGTGACGCACTTTCTGAGTGTCAGGCGGGCCAGTGTCATTCTGCTTCCTTTTTTTCAATGCAATCGGGATGTGAAGAAtaatcccaccccccaccccccctggATGGTCTCCTTTCCTCGACACGTGTAGTCCGTGCAATCCGAGGTACTATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU55928 True 1207 lncRNA 0.46 1 33094302 33095508

Neighbor

gene id symbol gene type direction distance location
AMCG00013503 ttc9b,LOC107096866,LOC103357803 coding upstream 10891 33080737 ~ 33083411 (+)
AMCG00013505 NA coding upstream 33022 33056761 ~ 33061280 (+)
AMCG00013504 NA coding upstream 48948 33032612 ~ 33045354 (+)
AMCG00013501 NA coding upstream 72502 33015315 ~ 33021800 (+)
AMCG00013502 NA coding upstream 98218 32977931 ~ 32996084 (+)
AMCG00013509 NA coding downstream 97127 33192635 ~ 33239625 (+)
AMCG00013510 NA coding downstream 177218 33272726 ~ 33284978 (+)
AMCG00013512 numbl,LOC106535595,LOC101072040,LOC106965209,LOC103154637 coding downstream 233803 33329311 ~ 33347695 (+)
AMCG00013514 NA coding downstream 356509 33452017 ~ 33464680 (+)
AMCG00013520 NA coding downstream 421647 33517155 ~ 33521234 (+)
G44861 NA non-coding upstream 3875 33088816 ~ 33090427 (+)
G44860 NA non-coding upstream 5542 33083728 ~ 33088760 (+)
G44790 NA non-coding upstream 256459 32837315 ~ 32837843 (+)
G44769 NA non-coding upstream 335922 32756738 ~ 32758380 (+)
G44747 NA non-coding upstream 438600 32655503 ~ 32655702 (+)
G44867 NA non-coding downstream 4966 33100474 ~ 33100687 (+)
G44868 map3k10,LOC107554498,LOC107560156 non-coding downstream 7131 33102639 ~ 33102873 (+)
G44869 NA non-coding downstream 7659 33103167 ~ 33103392 (+)
G44871 map3k10,LOC102787573 non-coding downstream 26512 33122020 ~ 33125449 (+)
G44954 NA non-coding downstream 344327 33439835 ~ 33441164 (+)
AMCG00013478 NA other upstream 638616 32423276 ~ 32455686 (+)
AMCG00013477 ppp1r37 other upstream 693850 32393818 ~ 32400452 (+)
AMCG00013473 LOC105911162,LOC105012052,LOC107580644,LOC107566293,LOC107577119,LOC107725066 other upstream 809351 32273268 ~ 32284951 (+)
AMCG00013468 NA other upstream 1182501 31901530 ~ 31911801 (+)
G44325 NA other upstream 2317133 30776851 ~ 30777169 (+)
G44870 NA other downstream 10784 33106292 ~ 33106595 (+)
AMCG00013515 dpf1,LOC107561370,LOC107749650,LOC107672425,LOC102781105 other downstream 281012 33376520 ~ 33412841 (+)
AMCG00013516 NA other downstream 346886 33442394 ~ 33449093 (+)
G45029 NA other downstream 600084 33695592 ~ 33699545 (+)
G45072 NA other downstream 1019165 34114673 ~ 34114939 (+)

Expression


Co-expression Network