G44871 (map3k10,LOC102787573)


Basic Information

Item Value
gene id G44871
gene name map3k10,LOC102787573
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 33122020 ~ 33125449 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU55934
CCTGGAGTGGGGGAATTTGCGGTACTCACTGTTGCTGGACTTGAGGTCTCGGTGGATGATGGGCACGATGGTCTCGTTGTGCAGGTAGTTCATACCGGTGGCGATCTGCACGGCCCAGTTGACCAACACACGGGGGGGCACTTTCTTGCCGGCTAGTGCACGGTTCAGGGCTCCCCCCCGGGCGTACTCCATCACCAGGCACAGGTTGGGCTCCCTCATGCAGACGCCCCGCAGCGCGATGATGTTGGGGTGCCGTAGCATCCAAAAGAGCCGGGCCTCCTGGCGCACGTTCTCAGCCGTGACGCTGATGTCCTCGTCAGGGTCCTGCCGGGCCGCCTTGACTGCCACCTCCTCGCCGCCCCACACACCCTTGTACACCTTCCCAAAGCCACCAGCGCCAATGATCTCCTCCAGGCGCAGCTGGGAGAAGTCGATTTCCAATGGCACAGGGCACTCACGTAGCAGGGAGCCCTGGATCTTGGTGTAGTTGGGGTCACGGGTCACGTAGTTGCTGGGGAAGATGCCCACTTTGTCCTTGATCTTGCCCGTCCACCAGCCCTCGTCACCGGATACCTTGGAGTCCTTGGAGAGCACCTCAAGCACGTCCCCTCGCCGTAGCGTCAGCTCCTCATCCGCCGTGGCCTCGTAGTCGAACACTGCTGTCCAGAAGGGGTTCCCGGCGGGGGGGTGGTGGCTGCAGTCCGGGGAGCTGGACGAAAGCGTAGAAGAATTCCAGCTGCCGTTCTCCGCCCCCCCTGAGTGGGGGCCCTCCCCACGTGCCGGTCCACAGCCACAGTTAGAGCAGGGGGACTGGGATGAGCCGCAGCTCATTTTACTGACGGATTGATCCATCGGGAGGCGATGGCGAGTGTGTGGAGAATCTCAGGCCTGCCGGGCATTGACATGAGCGTGCTCTGTAAAATCCATGGTGGCGACTCAGTAAAAACAGCCTTCACAGatccattattattgttttttataatttttttaaatcttgtatCAGTATCACTTAGCATTTATTATTGATGACAGTTCCTAAGGGAGGggaaagggagggggggggttgtctTGAAATGTGCTTAGGGTAATTCCATTGCTCTCTGAGCGGCTGTGCTTATAAAATCTCATAAGAAtcctgacttttttttctttttcttcaaagcATCCATCTGGTAGTGGGCAGAAACTAAGTGCCTTTCTGTCAtagcattaaaagaaaaagggttaaaataatgaatacaactATTCCATTCAGCCGTTTCAATTAGTCAGAGCATAGGAGACTGCACAGCCCCAAACCGGTGGTATGTTAATCTTTACAAATAAGAGGAGGAGAACAGGCAGCTGACGGTGGCCTATAATCAGCAACAATACCATGAACCTGTCTTTAGTTATCACTTTGTTTACTATGGACCAAATAAATAGCAACGGTCGGAGTATCACATTACAAATGCGCCTGTATACACCTTGcacagcagggagagagagagacactgcaAAAGCATCAGAagaataaataactattttctgCACTGAACGTGCAATATTTCCTTGACGGCTACATTTTTCGCTCCATTATctaaaacatgcatttgcaaTGACTAGACTTCCCCCTGTACCgttaaaaccaaataaatagtGTTAAGCATATAAAGACAGCACCCTGACCGACCACCGTTTTACTATCTTATCTGATACGGAGGATTAGCATTCTGAAATGCAGAgcccaataaaaacaaatctgttctgTATATTGTAAAGATCAAATAACCAGAGGTACAGTTAGTGTTACACTGCAATGCCTTTCCAGCGCTGGCAcgttgtgttattgttttaaggATATGATACCAGCTTGTCAAACAGGGAGCACAGCATCTCGCCTATGGGCTATTCCAAAAGACAATCACTCCCTTTACGTTGCTGGTGAAACACGTTTCTAAACTGAACAATTACCCTGATAAAGCCCATACATTACTAAGTGTAAGCCAGTTTAATGTCTTTAAATAgcgactgagagagagaaatcacaCGTCCATTTTAAGACTGGCAATGACGGCGGAAACCTCGCACTTTGACTTCGTCGATTTCCATAGTGCTACAGTGCCTAGGcatgtacatgtatgtacagtatgtgtagATGTATGCACAGCGGCCGTCTGTTATTTCAGCACTGGGTAGAGCAAACCAGGCACGGCCCCTGAGATTAATATTTACCTGATTCACAGAGAAAGGTAAACAACTGCACGGATGGGGCCACAGAAAACTACAGCAGTGTGTTGGCGGCTTGTTGTTTCCCCATTGCCCTTCTGATTATTATCAATCTCCTTTGGCCCCCCTCCTGCAAACGCAGCGATCATCCCCTCAAGTTATTTTCCTTCACGGGGCTGGCGAGATCAGACGCTGTACATCCAGGACGTGTTTCACAGAGACGCTGCGGGCTCCTGAGTCTGGCGCTGGGCACTATTTGTATCCCGGTCCGAAGCCGCCTGGTTGCTGCCTAACGAAATCCTCCCGGTAACAGCGTGGCCCATTTATTCCTTGAGATAACGAGCAGTCACGGGAAAGGGGCTCCACCATCTTCACGGTATCAACCCGCATGTCATCCCCAATGACTTACTCGTCGCCGTCCCCCTCCCGATTAGATGCCGCATTTCAGATCCCCCGTTTCAATTCTCACATCCCTCTATTCTCCAGGCACGGGCGTGCGTCTGTCGCTGCCAACACCACTCAAAACAAAGAAGCGAGCCGTCTTTGTGAAGTCTTTAACCGTTTGAGATCCACGGTGGCCCGTCTGTCCAGCGGCACTGGGCTCTACTGATGTCCCATTCAGTCGCCCGAGCTGTCAGCTGCTCCGGCTGACATTGTATCCAAATACACCGGCTCGGGCGCAGGGCATGCTGGGAGATGTAGTCCTGAAAGCGAGCAGGCGCTGCTCCACAACTCTGCCCGGATACAGCGCTCCCGTGAGGGAAATATACAGAAATTAATACAGAGGGCGACAATAACGCGTCTGGTGTGTAAGTGGCCGGTCTATGCGGggaacaaatgtatattttttaataagcaaGTTTTAATTCATCGCGCAGTCTGATTTGAAAGGTTGAGAGTAAGGGAATGCCGGCTACCTGCCACCTTGTCCAGTCACCTGTGTCACTTCCTGCTATGCTTCCGTGCGTCACCTTTGCTCGGATTCACTGTCGAGGTCCAGCGCCAAGGTGTAGATCAGCTCTAAACACCTCTTTTTGTGCtgcacttgttttttctttgacgTGCCCTCCAGCTACGCCTGTTTATTGGGCATCGGCTGCTACTGTTTACGTTTCCATTCCCAGTCTCCCCCTTCTCCAGAGCTGTCACTTTAAGGCTCGTCTCGGGGACTGCAATGAGGGCGGGCGGCCCGACGCGCGTCCCGGCTCGGACCCGACGGCAG

Function

symbol description
map3k10 Predicted to enable JUN kinase kinase kinase activity. Predicted to be involved in positive regulation of apoptotic process. Predicted to act upstream of or within protein phosphorylation. Orthologous to human MAP3K10 (mitogen-activated protein kinase kinase kinase 10).

NR:

description
mitogen-activated protein kinase kinase kinase 10

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU55934 True 3430 lncRNA 0.51 1 33122020 33125449

Neighbor

gene id symbol gene type direction distance location
AMCG00013503 ttc9b,LOC107096866,LOC103357803 coding upstream 38609 33080737 ~ 33083411 (+)
AMCG00013505 NA coding upstream 60740 33056761 ~ 33061280 (+)
AMCG00013504 NA coding upstream 76666 33032612 ~ 33045354 (+)
AMCG00013501 NA coding upstream 100220 33015315 ~ 33021800 (+)
AMCG00013502 NA coding upstream 125936 32977931 ~ 32996084 (+)
AMCG00013509 NA coding downstream 67186 33192635 ~ 33239625 (+)
AMCG00013510 NA coding downstream 147277 33272726 ~ 33284978 (+)
AMCG00013512 numbl,LOC106535595,LOC101072040,LOC106965209,LOC103154637 coding downstream 203862 33329311 ~ 33347695 (+)
AMCG00013514 NA coding downstream 326568 33452017 ~ 33464680 (+)
AMCG00013520 NA coding downstream 391706 33517155 ~ 33521234 (+)
G44869 NA non-coding upstream 18628 33103167 ~ 33103392 (+)
G44868 map3k10,LOC107554498,LOC107560156 non-coding upstream 19147 33102639 ~ 33102873 (+)
G44867 NA non-coding upstream 21333 33100474 ~ 33100687 (+)
G44865 NA non-coding upstream 26512 33094302 ~ 33095508 (+)
G44861 NA non-coding upstream 31593 33088816 ~ 33090427 (+)
G44954 NA non-coding downstream 314386 33439835 ~ 33441164 (+)
G44983 NA non-coding downstream 407323 33532772 ~ 33533155 (+)
G45100 NA non-coding downstream 1807757 34933206 ~ 34933787 (+)
G45108 NA non-coding downstream 1925408 35050857 ~ 35057957 (+)
G45124 NA non-coding downstream 1994630 35120079 ~ 35120344 (+)
G44870 NA other upstream 15425 33106292 ~ 33106595 (+)
AMCG00013478 NA other upstream 666334 32423276 ~ 32455686 (+)
AMCG00013477 ppp1r37 other upstream 721568 32393818 ~ 32400452 (+)
AMCG00013473 LOC105911162,LOC105012052,LOC107580644,LOC107566293,LOC107577119,LOC107725066 other upstream 837069 32273268 ~ 32284951 (+)
AMCG00013468 NA other upstream 1210219 31901530 ~ 31911801 (+)
AMCG00013515 dpf1,LOC107561370,LOC107749650,LOC107672425,LOC102781105 other downstream 251071 33376520 ~ 33412841 (+)
AMCG00013516 NA other downstream 316945 33442394 ~ 33449093 (+)
G45029 NA other downstream 570143 33695592 ~ 33699545 (+)
G45072 NA other downstream 989224 34114673 ~ 34114939 (+)
G45174 NA other downstream 2209441 35334890 ~ 35338052 (+)

Expression


Co-expression Network