G44995


Basic Information

Item Value
gene id G44995
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 33588590 ~ 33590089 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU56076
TTAAGGCTTTTtgcaaaatttattttttagataaaTTTGTTGTACAGTAAACAAGAATATAGCTGACAATAGCTCATTACAATAcaatgaatattaaaacaatacaacaagaCTAATAATCAATATGTACTTACATGTTAACACAGACAGGCTCCTTCCACATTCAAAGGAACAGTTTGGCAAGCTCTCTGCAGTTCTACAACCCCCCACAGGGAGGCGCAACAAGCCTGTCTGATTTGGAGTTTTTATTTGACTGCTTTAATAAAAGTCTGCTTGTCCTCTAGTTGATTAGAGTTtcagttaattttaaataattgattttattcaCCACACTACCTTGTACGTGCTTTGGAAATTAGCCCAAGAGGAAGTGGCAGAGGGAGTATTTCAGAGCTGCACAGCAACGAACAACGGACTCCAGTTAGAATAGAATTTCAGCAAGTTAGAATGACGAGTAGAAACAAGGAACCACACAGaaggacatttaaaatatacgcagcacacacagagacacacaaagtcagaggaaaagaaaaagaaaaaaggatgcAGACATGAAGGACTCCAAGCAAAAGAGCAGTGTGTACGTTTTCAGTCCTAGCAGCTGATTTGGCTTAATTGATCTTTACCGAATCCAAAGATTAAaagaaataacaagaagaaCATTAGAAATGGACTGAAGCACACTCACTATTTAAAGTTTTAACTGGCTGATTCAGTATTTTTCAATTCAAGAGGAAATGTGGTGTAAGTTCTGGCATTAGTCactggtaaatgtatttatctatttttagcTAGCATGCTTGAGATTAaccagtttttaaaaatgtattaatctttaGAGTATTGAATccttgatattttattatttttgcctttaaaaggtttaaatagGACATTTTTCAAtcttctaaatgtattttttctaaatacttaaatacttaataaaaatacatagataTCTCTCAATCCTCTGCTCTTTGCACAAATGTTGAGTTATCATAGCCTATTCTCTTACACACTTCCCCCACCCCAAACACACTTCACTCACCTTGCATTGATTGAGGGATTGTGAAGTCAGACTATAAGTATCCCTCTCTCATCGCAGTCTCCAATGTAGCAGACAATAAAGGACagcatttgaaaaagaaaatcttgcACTCCATAATGACCGAAAACCAGTAAAAGATGACAGGTGCCCAGAACAAGGCATCTGTGGGAAGGGTGGTTCAAGGGACACACATCATTAACACAGAAATGTTCACAAGACAAGTGCAGATTCTTTTCAGAATTTCTCATCCTAATCTCTGAATTGTGCAAATTCCTGCCAGAAGAACAAAGtataattacacaaaacaaacaaacaagtaccAAGTCCAGTCGGAGATCTCTTAACCTGGATTCAAAACAGATTCAGGCTGGTTAACAGATTTGGGCTGGATATGGGTAAATGGGTTGATTTCAAGTTTGGTAACATTGTGGGGTATTGTTGGGGGGGGG

Function

GO:

id name namespace
GO:0060841 venous blood vessel development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU56076 True 1500 lncRNA 0.36 1 33588590 33590089

Neighbor

gene id symbol gene type direction distance location
AMCG00013527 NA coding downstream 11986 33557031 ~ 33576604 (-)
AMCG00013517 NA coding downstream 147654 33429105 ~ 33440936 (-)
AMCG00013513 LOC106580829,LOC106612625,LOC105026889 coding downstream 221715 33354581 ~ 33366875 (-)
AMCG00013511 NA coding downstream 324714 33246164 ~ 33263876 (-)
AMCG00013506 NA coding downstream 445202 33130054 ~ 33143388 (-)
AMCG00013528 LOC107709035 coding upstream 6241 33596330 ~ 33609620 (-)
AMCG00013534 lrfn1,LOC106613031 coding upstream 942341 34532430 ~ 34544065 (-)
AMCG00013535 NA coding upstream 953988 34544077 ~ 34648703 (-)
AMCG00013538 NA coding upstream 1401793 34991882 ~ 34992115 (-)
AMCG00013536 NA coding upstream 1465528 35055617 ~ 35057435 (-)
G44941 NA non-coding downstream 166479 33416296 ~ 33422111 (-)
G44940 NA non-coding downstream 172371 33415533 ~ 33416219 (-)
G44936 NA non-coding downstream 240070 33343009 ~ 33348520 (-)
G44872 NA non-coding downstream 493172 33094397 ~ 33095418 (-)
G44864 NA non-coding downstream 498143 33088902 ~ 33090447 (-)
G45007 NA non-coding upstream 25319 33615408 ~ 33615642 (-)
G45010 NA non-coding upstream 31363 33621452 ~ 33621738 (-)
G45035 NA non-coding upstream 80654 33670743 ~ 33671683 (-)
G45038 NA non-coding upstream 92734 33682823 ~ 33683081 (-)
G45039 NA non-coding upstream 94300 33684389 ~ 33684898 (-)
AMCG00013518 NA other downstream 86843 33468849 ~ 33501747 (-)
AMCG00013488 NA other downstream 960686 32622153 ~ 32627904 (-)
G44719 NA other downstream 1020638 32565760 ~ 32567952 (-)
AMCG00013425 NA other downstream 2845947 30730287 ~ 30742643 (-)
AMCG00013411 anapc11,LOC107553313,LOC106564932 other downstream 3102259 30483305 ~ 30486331 (-)
G45037 NA other upstream 88135 33678224 ~ 33678907 (-)
AMCG00013531 NA other upstream 102755 33692844 ~ 33699712 (-)
AMCG00013578 NA other upstream 3289104 36879193 ~ 36885493 (-)
G45468 NA other upstream 3369088 36959177 ~ 36959914 (-)
G45571 NA other upstream 3540769 37130858 ~ 37223824 (-)

Expression


Co-expression Network