G45029


Basic Information

Item Value
gene id G45029
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 33695592 ~ 33699545 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU56113
GTAAGAGCCACAGtttattagttttaattgtCATTAAAAGAACCAAATGGCAGAGACGGTTACGTTTCACACTGGAGAAAAAGCCGTACTGGAGGGGGTGGGTGGTTTTGAGTCATCAGTGTTTCTtggtcttgtttttcttgtccttCTTTTGCTTCCTTCGCCCTCACTGtcggaggaagaagaggagccCCCATGGCCCTTGTGCTCCTTGCCGTGGCCCTTGTGCTCCTTGCAGTGATCCTTGTGGTCTTTGCCATGGCCCTTGTGGTCTTTGCAGTGATCCTTATGCTCTTTGCCGTGCTCCTTGTGATCTTTGCAATGATCCTTGCAGTCCTTCCCTTCCCCTCCTTTTTCTTGTGCCCGGCTTCGTCCTTGCTGGCGCATTTTTTGTACCTGCGGATAGATCCAGATCCatggctggctgtgtgtgttgcgGGAGAAGTCCGTGCGTCGAGGGTGCGGTGGCTGCGGCGGCGGCGGTGTCTCGCAGGGTGTGAGAGCTGCGGTGCGGGCGGGGATGTATTTAAGGTCGGGCGAGTGCGGGCAGGGGGGCCGGGGACGGCGGCGCGGGCGGAAGACAGCCGGTTTGGCAGCGGGCGG

Function

GO:

id name namespace
GO:0060841 venous blood vessel development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU56113 True 603 TUCP 0.57 4 33695592 33699545

Neighbor

gene id symbol gene type direction distance location
AMCG00013530 NA coding upstream 1695 33670735 ~ 33693897 (+)
AMCG00013526 NA coding upstream 26299 33664077 ~ 33669293 (+)
AMCG00013525 ppp5c coding upstream 33819 33647849 ~ 33661773 (+)
AMCG00013521 snrpd2,SNRPD2,LOC106612977 coding upstream 58384 33634739 ~ 33637208 (+)
AMCG00013529 NA coding upstream 76111 33618300 ~ 33619481 (+)
AMCG00013532 zgc:172282,LOC107697541,LOC107758157,LOC107678250,LOC107555640,LOC107749639 coding downstream 358068 34057613 ~ 34058995 (+)
AMCG00013533 NA coding downstream 381638 34081183 ~ 34084117 (+)
AMCG00013540 gmfg,LOC105934520,LOC107090391,LOC103032687,LOC106520392 coding downstream 1418864 35118409 ~ 35129062 (+)
AMCG00013539 med29 coding downstream 1438804 35138349 ~ 35141343 (+)
AMCG00013543 NA coding downstream 1515089 35214634 ~ 35217638 (+)
G44983 NA non-coding upstream 162437 33532772 ~ 33533155 (+)
G44954 NA non-coding upstream 254428 33439835 ~ 33441164 (+)
G44871 map3k10,LOC102787573 non-coding upstream 570143 33122020 ~ 33125449 (+)
G44869 NA non-coding upstream 592200 33103167 ~ 33103392 (+)
G44868 map3k10,LOC107554498,LOC107560156 non-coding upstream 592719 33102639 ~ 33102873 (+)
G45100 NA non-coding downstream 1233661 34933206 ~ 34933787 (+)
G45108 NA non-coding downstream 1351312 35050857 ~ 35057957 (+)
G45124 NA non-coding downstream 1420534 35120079 ~ 35120344 (+)
G45129 LOC105030512,LOC106584099,LOC106569888,LOC106613431,LOC106573797,LOC106609167 non-coding downstream 1441877 35141422 ~ 35142529 (+)
G45135 NA non-coding downstream 1475690 35175235 ~ 35175446 (+)
AMCG00013516 NA other upstream 246499 33442394 ~ 33449093 (+)
AMCG00013515 dpf1,LOC107561370,LOC107749650,LOC107672425,LOC102781105 other upstream 282751 33376520 ~ 33412841 (+)
G44870 NA other upstream 588997 33106292 ~ 33106595 (+)
AMCG00013478 NA other upstream 1239906 32423276 ~ 32455686 (+)
AMCG00013477 ppp1r37 other upstream 1295140 32393818 ~ 32400452 (+)
G45072 NA other downstream 415128 34114673 ~ 34114939 (+)
G45174 NA other downstream 1635345 35334890 ~ 35338052 (+)
G45209 LOC107575789 other downstream 1955757 35655302 ~ 35659833 (+)
AMCG00013560 sptbn4,LOC107602096,LOC103155361 other downstream 2361210 36060755 ~ 36085843 (+)
AMCG00013566 NA other downstream 2638717 36338262 ~ 36370087 (+)

Expression


Co-expression Network