G45035


Basic Information

Item Value
gene id G45035
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 33670743 ~ 33671683 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU56120
GATGAACAACCCATTACTCAGACGTCTTGTCCCAAACCTTGTCATATTCTGCCTTGCCTTGCCTCCAAATCAGCGTGTCAGACTGCAAGGGCACCAAGCCATCCACATAATAAATCTGGTCTATGCACTGCCAACTGAATTGCAAAGCGGTGATTAAAGCCGGAGTCACACTGAGTCAGGGTGCAGATGCATACTTCTGCACACCGACTTTAAAGGCTTGGTCTGATGCATAAACAGGATATTGACAGCGAGAGACATTGCATTAGTACAAGTCGACATTAACAGAAGCGAAACACATAAAAGCGGTCACTCCAGCTGCTGCCAACCAAAAACCCGTTTCCTCCCGCATCACTTcaactttctgtttttttttaggtttcagAAAGTCTAACAAACAAGGCGTCCGTGCCAATAAATCCAGCAGGAGCACGTCTTTAAAAACCCGCCACCGTCTCACCACACACCCGGTTGTGCATGCTCCGTCTGGGCGGTTGCTGCCGACTCTTCCTCCGCAGATTGATGGAAGGAGGGGAGTTGATCAGCTTCTTCATCCGAGCGCTGATGTGGTTGACATGTGTAGCAAATGCTCCCTCCGCCATCGCGGGGGTgaacaaatgaagaaaacaaatcggcaaataaagaaacaaatcagtCTAAACCGTGAAGCGGAGGGACGCGTCTGCCAGTGTGTACACGGTGCACGGTGTCCCAAAAGTTAGCAGCTCCAGTGCAACTCCTCCGTGTGTGTCTGGGTCCCCTCTTGCTACTGCACCCTCTCCGTTACAGTTGTGCTGGGGGGTGTATCCCGCTGCACTGTCAGTCGAGGGCTTGTTTTAGGTGAGTTAAATCCCTCCTTCGTCTCTCTTTCTCGCTGGAAACTCTTCGGAGACACTTCGGGAAAGTACGGAAAGTCCGGGGCGTAACGGCACACTGACGCACGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU56120 True 941 lncRNA 0.51 1 33670743 33671683

Neighbor

gene id symbol gene type direction distance location
AMCG00013528 LOC107709035 coding downstream 61123 33596330 ~ 33609620 (-)
AMCG00013527 NA coding downstream 94139 33557031 ~ 33576604 (-)
AMCG00013517 NA coding downstream 229807 33429105 ~ 33440936 (-)
AMCG00013513 LOC106580829,LOC106612625,LOC105026889 coding downstream 303868 33354581 ~ 33366875 (-)
AMCG00013511 NA coding downstream 406867 33246164 ~ 33263876 (-)
AMCG00013534 lrfn1,LOC106613031 coding upstream 860747 34532430 ~ 34544065 (-)
AMCG00013535 NA coding upstream 872394 34544077 ~ 34648703 (-)
AMCG00013538 NA coding upstream 1320199 34991882 ~ 34992115 (-)
AMCG00013536 NA coding upstream 1383934 35055617 ~ 35057435 (-)
AMCG00013537 LOC108246317 coding upstream 1394566 35066249 ~ 35067931 (-)
G45010 NA non-coding downstream 49005 33621452 ~ 33621738 (-)
G45007 NA non-coding downstream 55101 33615408 ~ 33615642 (-)
G44995 NA non-coding downstream 80654 33588590 ~ 33590089 (-)
G44941 NA non-coding downstream 248632 33416296 ~ 33422111 (-)
G44940 NA non-coding downstream 254524 33415533 ~ 33416219 (-)
G45038 NA non-coding upstream 11140 33682823 ~ 33683081 (-)
G45039 NA non-coding upstream 12706 33684389 ~ 33684898 (-)
G45040 NA non-coding upstream 14056 33685739 ~ 33686066 (-)
G45041 NA non-coding upstream 16139 33687822 ~ 33688931 (-)
G45042 NA non-coding upstream 17412 33689095 ~ 33689423 (-)
AMCG00013518 NA other downstream 168996 33468849 ~ 33501747 (-)
AMCG00013488 NA other downstream 1042839 32622153 ~ 32627904 (-)
G44719 NA other downstream 1102791 32565760 ~ 32567952 (-)
AMCG00013425 NA other downstream 2928100 30730287 ~ 30742643 (-)
AMCG00013411 anapc11,LOC107553313,LOC106564932 other downstream 3184412 30483305 ~ 30486331 (-)
G45037 NA other upstream 6541 33678224 ~ 33678907 (-)
AMCG00013531 NA other upstream 21161 33692844 ~ 33699712 (-)
AMCG00013578 NA other upstream 3207510 36879193 ~ 36885493 (-)
G45468 NA other upstream 3287494 36959177 ~ 36959914 (-)
G45571 NA other upstream 3459175 37130858 ~ 37223824 (-)

Expression


Co-expression Network