G45039



Basic Information


Item Value
gene id G45039
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 33684389 ~ 33684898 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU56124
GGGTCGGGTTTGGCCGAGGTCTTTGgcgccccctgctggagcccgctGTGCCTGATCTCGGCCAGCCTCTTCCTCATAGAGTTGGTCATCTGGGAGTCCAGCCGCCACACAAACACGCAACTGAGGAAGACAATCACGTGCATTACACGTGCACGACATGAACACCATGTCACCAGCTCCAGCTCACTTCAAAATCCTCAAAATCACCTGTAATTGCATTTCCTTTCATCTTTTCCTTTTGCACGTACACAAACAGCAATGAGTGCTTTACTGTGCCTGCCACTGACAAATCCCAGTCTGAATCGTTATACTGAGAAGGATTTCAATAATCCATCAAGATTATCCCTCAACTCTGAGAAGATTCggtaaaaacaaacttttaagtGTAAGTAAAGGGATTATATGAAAGCATATCAAAGTAATCTTCCAAAAACTACTGTTACTACTGTGTATGTATAACTGTAtacgtgcgtgtgtgtgtgcgtgtgtgtgtgtgtgcgtgtgcgtgtg

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU56124 True 510 lncRNA 0.46 1 33684389 33684898

Neighbor


gene id symbol gene type direction distance location
AMCG00013528 LOC107709035 coding downstream 74769 33596330 ~ 33609620 (-)
AMCG00013527 NA coding downstream 107785 33557031 ~ 33576604 (-)
AMCG00013517 NA coding downstream 243453 33429105 ~ 33440936 (-)
AMCG00013513 LOC106580829,LOC106612625,LOC105026889 coding downstream 317514 33354581 ~ 33366875 (-)
AMCG00013511 NA coding downstream 420513 33246164 ~ 33263876 (-)
AMCG00013534 lrfn1,LOC106613031 coding upstream 847532 34532430 ~ 34544065 (-)
AMCG00013535 NA coding upstream 859179 34544077 ~ 34648703 (-)
AMCG00013538 NA coding upstream 1306984 34991882 ~ 34992115 (-)
AMCG00013536 NA coding upstream 1370719 35055617 ~ 35057435 (-)
AMCG00013537 LOC108246317 coding upstream 1381351 35066249 ~ 35067931 (-)
G45038 NA non-coding downstream 1308 33682823 ~ 33683081 (-)
G45035 NA non-coding downstream 12706 33670743 ~ 33671683 (-)
G45010 NA non-coding downstream 62651 33621452 ~ 33621738 (-)
G45007 NA non-coding downstream 68747 33615408 ~ 33615642 (-)
G44995 NA non-coding downstream 94300 33588590 ~ 33590089 (-)
G45040 NA non-coding upstream 841 33685739 ~ 33686066 (-)
G45041 NA non-coding upstream 2924 33687822 ~ 33688931 (-)
G45042 NA non-coding upstream 4197 33689095 ~ 33689423 (-)
G45043 NA non-coding upstream 4548 33689446 ~ 33690369 (-)
G45048 NA non-coding upstream 29141 33714039 ~ 33715806 (-)
G45037 NA other downstream 5482 33678224 ~ 33678907 (-)
AMCG00013518 NA other downstream 182642 33468849 ~ 33501747 (-)
AMCG00013488 NA other downstream 1056485 32622153 ~ 32627904 (-)
G44719 NA other downstream 1116437 32565760 ~ 32567952 (-)
AMCG00013425 NA other downstream 2941746 30730287 ~ 30742643 (-)
AMCG00013531 NA other upstream 7946 33692844 ~ 33699712 (-)
AMCG00013578 NA other upstream 3194295 36879193 ~ 36885493 (-)
G45468 NA other upstream 3274279 36959177 ~ 36959914 (-)
G45571 NA other upstream 3445960 37130858 ~ 37223824 (-)
G45614 supt5h other upstream 3798018 37482916 ~ 37483608 (-)

Expression



Co-expression Network