G45041



Basic Information


Item Value
gene id G45041
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 33687822 ~ 33688931 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU56126
TGCTGCTCTATGGTACTCGCCTGTCTTCCAGTGGGCATCAGTGTCTCTTGGCTTCTGCCCACGTCCCTCGGTGTCTCTTCCCCacccccactctctccctctttcaatctctcctctctctcacgctCTTCTCTATTGCTACTGTGTCTGAATTTTCCTCAGTCCATCTCAGTCTGCTCAACTGGTCGGTGGACGGCTGGTGCTCTCTATTATAGGGAGCactggactgcagctgtcttttaGAGTGCAGTGCTGAGGCTAGGAAATCCCCTTTCACTGTCCCCCCCCTCTCCATGTCTGACATCATCCTTCACTACCAGACTCTGACACCACTGCTCACACACTAAAGGGgaaggggggatggggggggggtgacgTAATGGAGCATTCCAGAGAGAGGGATACTAAGCACAGACAAACTCCatagaaaaacactttaaaaaacaatggctTAAAATGAAAGCGAAAAGGAAAGGAACGGACGTGCAACTTTTCTACAGACCCTGGCAGCGACTGTCATAAAAATGTCTGATCCACTGCCAAAGCAAAAGTGAAAAAGATCAATTGAGAGACTGTCTCGCTCCCCACTCCCTTCTGTCAAATAGGATCTAGTAAAAGAAGGggaataaaagagaaagaaaaataggaCACTACATAGTCAGACACAAACAGTCAGGACtgacctctccctctccctccttctcctcctcttcctcctcctccattccCAGCAGACTGTCCAGGCTCTGGGGGTGGAAGTTGGAGTCATCGGGGGCCGGACTGTCCTGGGAGGGGCCTTCCTCTCTCTGGGGGCTGGGGGACATGGGCAGCTGCAGGCTGTGGGTGGCCAGCACGGTGCGGATGGCCTGGGGATCTGACTGCTCGGCCCAGCGGCCCCGTGGACGGTAGGGGTTCTGCTCGGCGGCAGGCTGCTCCACCGTCTCGTCCGCTGAACTCTCGGCGGCACCCTGTTGCACGCACGGACAGACACGCTCAGTCAGACGCACGTGGTGCTGTTGGCATGTGTAGTGAAGCAGATCACAGTTGTTTGCCACTATACAGGTATGCATGCAGAGGGGCCTTCTGAATATCTATTAGAAAAGGCCTTCT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU56126 True 1110 lncRNA 0.54 1 33687822 33688931

Neighbor


gene id symbol gene type direction distance location
AMCG00013528 LOC107709035 coding downstream 78202 33596330 ~ 33609620 (-)
AMCG00013527 NA coding downstream 111218 33557031 ~ 33576604 (-)
AMCG00013517 NA coding downstream 246886 33429105 ~ 33440936 (-)
AMCG00013513 LOC106580829,LOC106612625,LOC105026889 coding downstream 320947 33354581 ~ 33366875 (-)
AMCG00013511 NA coding downstream 423946 33246164 ~ 33263876 (-)
AMCG00013534 lrfn1,LOC106613031 coding upstream 843499 34532430 ~ 34544065 (-)
AMCG00013535 NA coding upstream 855146 34544077 ~ 34648703 (-)
AMCG00013538 NA coding upstream 1302951 34991882 ~ 34992115 (-)
AMCG00013536 NA coding upstream 1366686 35055617 ~ 35057435 (-)
AMCG00013537 LOC108246317 coding upstream 1377318 35066249 ~ 35067931 (-)
G45040 NA non-coding downstream 1756 33685739 ~ 33686066 (-)
G45039 NA non-coding downstream 2924 33684389 ~ 33684898 (-)
G45038 NA non-coding downstream 4741 33682823 ~ 33683081 (-)
G45035 NA non-coding downstream 16139 33670743 ~ 33671683 (-)
G45010 NA non-coding downstream 66084 33621452 ~ 33621738 (-)
G45042 NA non-coding upstream 164 33689095 ~ 33689423 (-)
G45043 NA non-coding upstream 515 33689446 ~ 33690369 (-)
G45048 NA non-coding upstream 25108 33714039 ~ 33715806 (-)
G45055 NA non-coding upstream 194515 33883446 ~ 33883745 (-)
G45062 NA non-coding upstream 281111 33970042 ~ 33970319 (-)
G45037 NA other downstream 8915 33678224 ~ 33678907 (-)
AMCG00013518 NA other downstream 186075 33468849 ~ 33501747 (-)
AMCG00013488 NA other downstream 1059918 32622153 ~ 32627904 (-)
G44719 NA other downstream 1119870 32565760 ~ 32567952 (-)
AMCG00013425 NA other downstream 2945179 30730287 ~ 30742643 (-)
AMCG00013531 NA other upstream 3913 33692844 ~ 33699712 (-)
AMCG00013578 NA other upstream 3190262 36879193 ~ 36885493 (-)
G45468 NA other upstream 3270246 36959177 ~ 36959914 (-)
G45571 NA other upstream 3441927 37130858 ~ 37223824 (-)
G45614 supt5h other upstream 3793985 37482916 ~ 37483608 (-)

Expression



Co-expression Network