G45072


Basic Information

Item Value
gene id G45072
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 34114673 ~ 34114939 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU56162
tcagcgtggtgatgtgctgggagaaggagagtgcaggatcgagggtgactcctagatttttagcagaagaaggagagagtgtggtggattccaaggggatcgagatggggaggtcagcagaaggtgaggaagagtgggggaaaaagaggagatctgatttggagaggttgagcttgaggtggtgcgagtgcatccaggcggaaatggcagacaagcaggaagagatgcgtgaggggatgagagggtcagaggagggaaaagacagga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU56162 True 267 TUCP 0.54 1 34114673 34114939

Neighbor

gene id symbol gene type direction distance location
AMCG00013533 NA coding upstream 30556 34081183 ~ 34084117 (+)
AMCG00013532 zgc:172282,LOC107697541,LOC107758157,LOC107678250,LOC107555640,LOC107749639 coding upstream 55678 34057613 ~ 34058995 (+)
AMCG00013530 NA coding upstream 420776 33670735 ~ 33693897 (+)
AMCG00013526 NA coding upstream 445380 33664077 ~ 33669293 (+)
AMCG00013525 ppp5c coding upstream 452900 33647849 ~ 33661773 (+)
AMCG00013540 gmfg,LOC105934520,LOC107090391,LOC103032687,LOC106520392 coding downstream 1003470 35118409 ~ 35129062 (+)
AMCG00013539 med29 coding downstream 1023410 35138349 ~ 35141343 (+)
AMCG00013543 NA coding downstream 1099695 35214634 ~ 35217638 (+)
AMCG00013546 NA coding downstream 1192425 35307364 ~ 35309555 (+)
AMCG00013545 NA coding downstream 1211052 35325991 ~ 35331505 (+)
G44983 NA non-coding upstream 581518 33532772 ~ 33533155 (+)
G44954 NA non-coding upstream 673509 33439835 ~ 33441164 (+)
G44871 map3k10,LOC102787573 non-coding upstream 989224 33122020 ~ 33125449 (+)
G44869 NA non-coding upstream 1011281 33103167 ~ 33103392 (+)
G44868 map3k10,LOC107554498,LOC107560156 non-coding upstream 1011800 33102639 ~ 33102873 (+)
G45100 NA non-coding downstream 818267 34933206 ~ 34933787 (+)
G45108 NA non-coding downstream 935918 35050857 ~ 35057957 (+)
G45124 NA non-coding downstream 1005140 35120079 ~ 35120344 (+)
G45129 LOC105030512,LOC106584099,LOC106569888,LOC106613431,LOC106573797,LOC106609167 non-coding downstream 1026483 35141422 ~ 35142529 (+)
G45135 NA non-coding downstream 1060296 35175235 ~ 35175446 (+)
G45029 NA other upstream 415128 33695592 ~ 33699545 (+)
AMCG00013516 NA other upstream 665580 33442394 ~ 33449093 (+)
AMCG00013515 dpf1,LOC107561370,LOC107749650,LOC107672425,LOC102781105 other upstream 701832 33376520 ~ 33412841 (+)
G44870 NA other upstream 1008078 33106292 ~ 33106595 (+)
AMCG00013478 NA other upstream 1658987 32423276 ~ 32455686 (+)
G45174 NA other downstream 1219951 35334890 ~ 35338052 (+)
G45209 LOC107575789 other downstream 1540363 35655302 ~ 35659833 (+)
AMCG00013560 sptbn4,LOC107602096,LOC103155361 other downstream 1945816 36060755 ~ 36085843 (+)
AMCG00013566 NA other downstream 2223323 36338262 ~ 36370087 (+)
G45338 NA other downstream 2288415 36403354 ~ 36403901 (+)

Expression


Co-expression Network