G45124


Basic Information

Item Value
gene id G45124
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 35120079 ~ 35120344 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU56231
gTCGCTTGGCCCACTGTtctctgccaattctgagctgatggcactgctggacatcttccgattgtgaagggaagtaagcatgatgtgtctttcatctgctgcagtaagtttccttggccaaccactgtgtctacggtcctcaaagTTGCCCGTTtcattgtgcttcttcaaaagagcttggacagcacatctggaaacccctgtctgccttgaaatgtctgcctgggagagacctttctgatgcagtataactaccttgtgtcttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU56231 True 266 lncRNA 0.49 1 35120079 35120344

Neighbor

gene id symbol gene type direction distance location
AMCG00013533 NA coding upstream 1035962 34081183 ~ 34084117 (+)
AMCG00013532 zgc:172282,LOC107697541,LOC107758157,LOC107678250,LOC107555640,LOC107749639 coding upstream 1061084 34057613 ~ 34058995 (+)
AMCG00013530 NA coding upstream 1426182 33670735 ~ 33693897 (+)
AMCG00013526 NA coding upstream 1450786 33664077 ~ 33669293 (+)
AMCG00013525 ppp5c coding upstream 1458306 33647849 ~ 33661773 (+)
AMCG00013539 med29 coding downstream 18005 35138349 ~ 35141343 (+)
AMCG00013543 NA coding downstream 94290 35214634 ~ 35217638 (+)
AMCG00013546 NA coding downstream 187020 35307364 ~ 35309555 (+)
AMCG00013545 NA coding downstream 205647 35325991 ~ 35331505 (+)
AMCG00013549 LOC101074320 coding downstream 686457 35806801 ~ 35814022 (+)
G45108 NA non-coding upstream 62122 35050857 ~ 35057957 (+)
G45100 NA non-coding upstream 186292 34933206 ~ 34933787 (+)
G44983 NA non-coding upstream 1586924 33532772 ~ 33533155 (+)
G44954 NA non-coding upstream 1678915 33439835 ~ 33441164 (+)
G44871 map3k10,LOC102787573 non-coding upstream 1994630 33122020 ~ 33125449 (+)
G45129 LOC105030512,LOC106584099,LOC106569888,LOC106613431,LOC106573797,LOC106609167 non-coding downstream 21078 35141422 ~ 35142529 (+)
G45135 NA non-coding downstream 54891 35175235 ~ 35175446 (+)
G45150 NA non-coding downstream 106484 35226828 ~ 35227029 (+)
G45162 NA non-coding downstream 159561 35279905 ~ 35280457 (+)
G45170 NA non-coding downstream 179528 35299872 ~ 35302781 (+)
G45072 NA other upstream 1005140 34114673 ~ 34114939 (+)
G45029 NA other upstream 1420534 33695592 ~ 33699545 (+)
AMCG00013516 NA other upstream 1670986 33442394 ~ 33449093 (+)
AMCG00013515 dpf1,LOC107561370,LOC107749650,LOC107672425,LOC102781105 other upstream 1707238 33376520 ~ 33412841 (+)
G44870 NA other upstream 2013484 33106292 ~ 33106595 (+)
G45174 NA other downstream 214546 35334890 ~ 35338052 (+)
G45209 LOC107575789 other downstream 534958 35655302 ~ 35659833 (+)
AMCG00013560 sptbn4,LOC107602096,LOC103155361 other downstream 940411 36060755 ~ 36085843 (+)
AMCG00013566 NA other downstream 1217918 36338262 ~ 36370087 (+)
G45338 NA other downstream 1283010 36403354 ~ 36403901 (+)

Expression


Co-expression Network