G45150


Basic Information

Item Value
gene id G45150
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 35226828 ~ 35227029 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU56259
GCTGGGTCATCCTCGCGGTGGATGTGCCATTCCCCCATGTCCCGTCCTTCTCCATATCGTACCCATCTGGTCCTCGGGGTGGACTGGCATGTAGGTGGCTCCCCTGTTGCTCCCTGATCCCTCCAGGAACCAGGCTTGTCTTGCATAGACCTCTCTGCTTCCACAGCATCACTTGGCTCCCCTCCAGTCTCTGCTCCAGCNN

Function

GO:

id name namespace
GO:0050900 leukocyte migration biological_process
GO:0002376 immune system process biological_process
GO:0030595 leukocyte chemotaxis biological_process
GO:0060326 cell chemotaxis biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU56259 True 202 lncRNA 0.59 1 35226828 35227029

Neighbor

gene id symbol gene type direction distance location
AMCG00013543 NA coding upstream 9190 35214634 ~ 35217638 (+)
AMCG00013539 med29 coding upstream 85485 35138349 ~ 35141343 (+)
AMCG00013540 gmfg,LOC105934520,LOC107090391,LOC103032687,LOC106520392 coding upstream 97766 35118409 ~ 35129062 (+)
AMCG00013533 NA coding upstream 1142711 34081183 ~ 34084117 (+)
AMCG00013532 zgc:172282,LOC107697541,LOC107758157,LOC107678250,LOC107555640,LOC107749639 coding upstream 1167833 34057613 ~ 34058995 (+)
AMCG00013546 NA coding downstream 80335 35307364 ~ 35309555 (+)
AMCG00013545 NA coding downstream 98962 35325991 ~ 35331505 (+)
AMCG00013549 LOC101074320 coding downstream 579772 35806801 ~ 35814022 (+)
AMCG00013552 NA coding downstream 638756 35865785 ~ 35869903 (+)
AMCG00013556 NA coding downstream 672062 35899091 ~ 35908745 (+)
G45135 NA non-coding upstream 51382 35175235 ~ 35175446 (+)
G45129 LOC105030512,LOC106584099,LOC106569888,LOC106613431,LOC106573797,LOC106609167 non-coding upstream 84299 35141422 ~ 35142529 (+)
G45124 NA non-coding upstream 106484 35120079 ~ 35120344 (+)
G45108 NA non-coding upstream 168871 35050857 ~ 35057957 (+)
G45100 NA non-coding upstream 293041 34933206 ~ 34933787 (+)
G45162 NA non-coding downstream 52876 35279905 ~ 35280457 (+)
G45170 NA non-coding downstream 72843 35299872 ~ 35302781 (+)
G45207 NA non-coding downstream 323950 35550979 ~ 35551223 (+)
G45226 NA non-coding downstream 731078 35958107 ~ 35959584 (+)
G45227 NA non-coding downstream 741087 35968116 ~ 35968417 (+)
G45072 NA other upstream 1111889 34114673 ~ 34114939 (+)
G45029 NA other upstream 1527283 33695592 ~ 33699545 (+)
AMCG00013516 NA other upstream 1777735 33442394 ~ 33449093 (+)
AMCG00013515 dpf1,LOC107561370,LOC107749650,LOC107672425,LOC102781105 other upstream 1813987 33376520 ~ 33412841 (+)
G44870 NA other upstream 2120233 33106292 ~ 33106595 (+)
G45174 NA other downstream 107861 35334890 ~ 35338052 (+)
G45209 LOC107575789 other downstream 428273 35655302 ~ 35659833 (+)
AMCG00013560 sptbn4,LOC107602096,LOC103155361 other downstream 833726 36060755 ~ 36085843 (+)
AMCG00013566 NA other downstream 1111233 36338262 ~ 36370087 (+)
G45338 NA other downstream 1176325 36403354 ~ 36403901 (+)

Expression


Co-expression Network