G45226


Basic Information

Item Value
gene id G45226
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 35958107 ~ 35959584 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU56352
TCCAGAAAAATGgtcgtaagccagtgaatccgtcaactgtgaacTTCTCCGTcatgtgcaccttgctaccccagccaaaCATGCACACCCTGGTCTGTTTCCTggttccttttataggggaagtggtgggcggggctatggccatcaggagccctgctggcttctggggtttggagtcttggaggagatgttttgtagtctcctccactgaaagacccgccctgaccccagccttgcctctcacactgccacaacacacacacatgttttcTATCAAAACGTATGTAAGGCTGAGCACTAGCCTGGCCTGAAGCTTTAGGGGATAGGTATGGGTGGGAGTTTCGCTCCCTTTCTTATGGCCTGTTAGCAGTcttataaaaaacatgttttatagcCAAAAGGTCTATTAGCCGGCTTTTGAGAGTTAGCGTTTTGAGACCATTTGATTCCATCAGTTGTGCTATGCTAACGaaacaattaattcaaatgtCTTCAAACTGGACGCACAGAATTGAAAAGGTTTTGATCGATTCGTATGAATCTGAATGAGTAAGCAATCAGGctgaaatggcaaaataaacaaagtaccCCTTTAAGTTGCTTTTACCCTCCCTAAGATGGTTTTCTTTAACACTTCATTAACAGCTGGTACCAACTTTTCTGAGTAACTCCACAAATGGTCATCTCGGATTAGGTCTGACTGGTGCAGATCATGTCTCTGAGGCCGCCTGATGTGGTACATCCGTGCAAAATTCTGTTGGACTCTTATTGAATGATATTTAAAGTTCAAAAGTCCGTGGACTGTGACTTCCTGCACTAACCTGGGGTTCACAATGATTTTGATAGGATTCAAAATCCCTGCTGCATTTGGCTCTCGGTAAATGTGCTCCAGCACGTTAACCCCAGGGATGTCTTTCCATTCCTGCAAGAGGAACCTGCCACTCTTTTCTTTGATGTTTTTAGGGAAAACATGGTTCTCGAACTCAAAACCTGTGTCTGGACCGTTCTCTTGTGTAAGGTTTTCCATCATCTCATTCCAGGTCCTGTGCTTTAGGGGTAGAATGATCTCATCAATGTCATTCAGGGCTACGTATTTGGTCTTGTACATGTACCTGTACACACAGTCATTGAGGGCTGCCAGCTGGCCGTAGTAGTGCAGATCTCCAGGAAATTCAGAAGGGTGCCATCCACCAGAAACTTTGATGTAGGACGTGATCAGCCAAGGTATGATGTCCACAAGGCCTGTGCTGTGGTAGAAATCTAGCACACTTTGGATTTCTGGGCTACAGCTGTTTTTGTAGATGGCCACTTTCTGGACCCCTAGCAGTTTGTACATCTCAATAGTCTGCACAAGCTGCAAGACATTGTTGAAATTTCCAAACATGGTCGAAATGCACACTGTGAAGTTGTAAGGGAAGGTGTTGgtctggggctggggctggctGTTGTGTATTGGAAGGAAAGACACATCTTGGTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU56352 True 1478 lncRNA 0.46 1 35958107 35959584

Neighbor

gene id symbol gene type direction distance location
AMCG00013556 NA coding upstream 49362 35899091 ~ 35908745 (+)
AMCG00013552 NA coding upstream 88204 35865785 ~ 35869903 (+)
AMCG00013549 LOC101074320 coding upstream 144085 35806801 ~ 35814022 (+)
AMCG00013545 NA coding upstream 626602 35325991 ~ 35331505 (+)
AMCG00013546 NA coding upstream 648552 35307364 ~ 35309555 (+)
AMCG00013558 sptbn4,LOC106612708 coding downstream 137571 36097155 ~ 36111063 (+)
AMCG00013559 shkbp1,LOC106612709 coding downstream 159982 36119566 ~ 36132259 (+)
AMCG00013564 LOC106612713,LOC106580732,LOC105023074,LOC108435511 coding downstream 421385 36380969 ~ 36403018 (+)
AMCG00013568 NA coding downstream 475302 36434886 ~ 36444730 (+)
AMCG00013567 NA coding downstream 503268 36462852 ~ 36476392 (+)
G45207 NA non-coding upstream 406884 35550979 ~ 35551223 (+)
G45170 NA non-coding upstream 655326 35299872 ~ 35302781 (+)
G45162 NA non-coding upstream 677650 35279905 ~ 35280457 (+)
G45150 NA non-coding upstream 731078 35226828 ~ 35227029 (+)
G45135 NA non-coding upstream 782661 35175235 ~ 35175446 (+)
G45227 NA non-coding downstream 8532 35968116 ~ 35968417 (+)
G45228 NA non-coding downstream 9085 35968669 ~ 35970696 (+)
G45229 NA non-coding downstream 13894 35973478 ~ 35973877 (+)
G45230 NA non-coding downstream 14654 35974238 ~ 35984433 (+)
G45276 NA non-coding downstream 154471 36114055 ~ 36117331 (+)
G45209 LOC107575789 other upstream 298274 35655302 ~ 35659833 (+)
G45174 NA other upstream 620055 35334890 ~ 35338052 (+)
G45072 NA other upstream 1843168 34114673 ~ 34114939 (+)
G45029 NA other upstream 2258562 33695592 ~ 33699545 (+)
AMCG00013516 NA other upstream 2509014 33442394 ~ 33449093 (+)
AMCG00013560 sptbn4,LOC107602096,LOC103155361 other downstream 101171 36060755 ~ 36085843 (+)
AMCG00013566 NA other downstream 378678 36338262 ~ 36370087 (+)
G45338 NA other downstream 443770 36403354 ~ 36403901 (+)
AMCG00013571 eml2,LOC107757343,LOC107685092,LOC106530730 other downstream 660818 36620402 ~ 36646066 (+)
G45406 nova2,LOC103039352,LOC103141028,LOC107669728,LOC107089881,LOC107548550 other downstream 777093 36736677 ~ 36738479 (+)

Expression


Co-expression Network