G45227



Basic Information


Item Value
gene id G45227
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 35968116 ~ 35968417 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU56353
CTGGTGTCATTGGTGGCCATGAAAAAGACATCATCGGGAGCATCAATCCAGTTCATCCGTCGCCCTTTGACAGGTGGCAGAGATCCTTGCTTCATCACGCGTTGGCTCCTCTCCAGAGGTTTCCCATTCAGCAGGTAGCTCTTGTTTAACGTAGCCTTGGAGAAccataaaccaaaaaaaaattaaaagacagCTGGAAACAGAGACGGTCCTATACTAAAACTATCCTGAACATAGTTTTGGAAATAGCTAAAACAGTCCACATTAAGTTTCCAATGATGGGCAGCATGGGACAGGCAACT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU56353 True 302 lncRNA 0.45 1 35968116 35968417
Loading

Neighbor


gene id symbol gene type direction distance location
AMCG00013556 NA coding upstream 59371 35899091 ~ 35908745 (+)
AMCG00013552 NA coding upstream 98213 35865785 ~ 35869903 (+)
AMCG00013549 LOC101074320 coding upstream 154094 35806801 ~ 35814022 (+)
AMCG00013545 NA coding upstream 636611 35325991 ~ 35331505 (+)
AMCG00013546 NA coding upstream 658561 35307364 ~ 35309555 (+)
AMCG00013558 sptbn4,LOC106612708 coding downstream 128738 36097155 ~ 36111063 (+)
AMCG00013559 shkbp1,LOC106612709 coding downstream 151149 36119566 ~ 36132259 (+)
AMCG00013564 LOC106612713,LOC106580732,LOC105023074,LOC108435511 coding downstream 412552 36380969 ~ 36403018 (+)
AMCG00013568 NA coding downstream 466469 36434886 ~ 36444730 (+)
AMCG00013567 NA coding downstream 494435 36462852 ~ 36476392 (+)
G45226 NA non-coding upstream 8532 35958107 ~ 35959584 (+)
G45207 NA non-coding upstream 416893 35550979 ~ 35551223 (+)
G45170 NA non-coding upstream 665335 35299872 ~ 35302781 (+)
G45162 NA non-coding upstream 687659 35279905 ~ 35280457 (+)
G45150 NA non-coding upstream 741087 35226828 ~ 35227029 (+)
G45228 NA non-coding downstream 252 35968669 ~ 35970696 (+)
G45229 NA non-coding downstream 5061 35973478 ~ 35973877 (+)
G45230 NA non-coding downstream 5821 35974238 ~ 35984433 (+)
G45276 NA non-coding downstream 145638 36114055 ~ 36117331 (+)
G45301 NA non-coding downstream 191717 36160134 ~ 36187942 (+)
G45209 LOC107575789 other upstream 308283 35655302 ~ 35659833 (+)
G45174 NA other upstream 630064 35334890 ~ 35338052 (+)
G45072 NA other upstream 1853177 34114673 ~ 34114939 (+)
G45029 NA other upstream 2268571 33695592 ~ 33699545 (+)
AMCG00013516 NA other upstream 2519023 33442394 ~ 33449093 (+)
AMCG00013560 sptbn4,LOC107602096,LOC103155361 other downstream 92338 36060755 ~ 36085843 (+)
AMCG00013566 NA other downstream 369845 36338262 ~ 36370087 (+)
G45338 NA other downstream 434937 36403354 ~ 36403901 (+)
AMCG00013571 eml2,LOC107757343,LOC107685092,LOC106530730 other downstream 651985 36620402 ~ 36646066 (+)
G45406 nova2,LOC103039352,LOC103141028,LOC107669728,LOC107089881,LOC107548550 other downstream 768260 36736677 ~ 36738479 (+)

Expression


G45227 Expression in all Baseline Samples

Bar chart with 16 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.5.
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G45227 Expression in each Bioproject

Bar chart with 2 bars.
G45227 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 0.5.
End of interactive chart.

Co-expression Network