G45499


Basic Information

Item Value
gene id G45499
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 37063957 ~ 37064264 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU56685
ccctttgcaaacggaagatgtccagcagtgccatcagctcagaattggcagaaaacagtgggaccctggtacacccatctactgtccggagaagtctggtcagaagtggccttcatggaagacttgcagccaaaaagccatacctctgacgtggcaacaatACCAAGTGattcaactatgcacaaaaacacaggaactggggtgcagaaaaatggcagcaggtgctctggactgatgagtcaaaatctgaaatatttggctgtagcagaaggcagtttgttctccgaagggctggagagcggtacacg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU56685 True 308 lncRNA 0.50 1 37063957 37064264

Neighbor

gene id symbol gene type direction distance location
AMCG00013581 NA coding upstream 7181 37047933 ~ 37056776 (+)
AMCG00013582 NA coding upstream 29483 37018451 ~ 37034474 (+)
AMCG00013583 clip3,LOC106612689,LOC106580752 coding upstream 50561 36977272 ~ 37013396 (+)
AMCG00013575 NA coding upstream 203160 36843528 ~ 36860797 (+)
AMCG00013576 NA coding upstream 253506 36806758 ~ 36810451 (+)
AMCG00013584 NA coding downstream 7250 37071514 ~ 37074315 (+)
AMCG00013589 capns1,LOC102233422,LOC105011036,LOC105909712 coding downstream 37422 37101686 ~ 37105980 (+)
AMCG00013586 NA coding downstream 64754 37129018 ~ 37133189 (+)
AMCG00013588 ckma,LOC101077669,LOC103045415,LOC103141037 coding downstream 90003 37154267 ~ 37170647 (+)
AMCG00013593 NA coding downstream 162392 37226656 ~ 37228647 (+)
G45408 NA non-coding upstream 280337 36782569 ~ 36783620 (+)
G45405 NA non-coding upstream 334001 36727950 ~ 36729956 (+)
G45403 NA non-coding upstream 343968 36719652 ~ 36719989 (+)
G45397 NA non-coding upstream 359064 36704652 ~ 36704893 (+)
G45395 NA non-coding upstream 363894 36698798 ~ 36700063 (+)
G45538 NA non-coding downstream 186937 37251201 ~ 37290765 (+)
G45737 NA non-coding downstream 812119 37876383 ~ 37932198 (+)
G45805 NA non-coding downstream 1008991 38073255 ~ 38073852 (+)
G45812 NA non-coding downstream 1033726 38097990 ~ 38098531 (+)
G45854 NA non-coding downstream 1146826 38211090 ~ 38212886 (+)
G45439 NA other upstream 186354 36874907 ~ 36877603 (+)
G45406 nova2,LOC103039352,LOC103141028,LOC107669728,LOC107089881,LOC107548550 other upstream 325478 36736677 ~ 36738479 (+)
AMCG00013571 eml2,LOC107757343,LOC107685092,LOC106530730 other upstream 417891 36620402 ~ 36646066 (+)
G45338 NA other upstream 660056 36403354 ~ 36403901 (+)
AMCG00013566 NA other upstream 693870 36338262 ~ 36370087 (+)
AMCG00013587 zgc:101731,LOC107683430,LOC107757427,LOC105909676,LOC108425805,LOC108277511,LOC103044784,LOC106580895,LOC100194580 other downstream 47504 37111768 ~ 37122611 (+)
AMCG00013595 NA other downstream 250949 37315213 ~ 37327711 (+)
AMCG00013616 ccdc9 other downstream 740943 37805207 ~ 37817764 (+)
AMCG00013618 NA other downstream 754107 37818371 ~ 37821575 (+)
AMCG00013629 hnrnpl2,LOC105006371 other downstream 990633 38054897 ~ 38069645 (+)

Expression


Co-expression Network