Gene
RNA
| Item | Value |
|---|---|
| gene id | G45862 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 38245956 ~ 38246418 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0005509 | calcium ion binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU57162 | True | 313 | lncRNA | 0.57 | 2 | 38245956 | 38246418 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00013638 | NA | coding | upstream | 51626 | 38188374 ~ 38194330 (+) |
| AMCG00013631 | NA | coding | upstream | 124152 | 38118324 ~ 38121804 (+) |
| AMCG00013630 | LOC101464407 | coding | upstream | 158145 | 38077005 ~ 38087811 (+) |
| AMCG00013625 | NA | coding | upstream | 192395 | 38051221 ~ 38053561 (+) |
| AMCG00013626 | slc8a2,LOC105026810,LOC106612604,LOC106580848,LOC103476200 | coding | upstream | 201406 | 38032609 ~ 38044550 (+) |
| AMCG00013640 | NA | coding | downstream | 99399 | 38345817 ~ 38353162 (+) |
| AMCG00013646 | NA | coding | downstream | 136051 | 38382469 ~ 38398767 (+) |
| AMCG00013647 | napa,LOC108413256,LOC103368726 | coding | downstream | 205371 | 38451789 ~ 38458783 (+) |
| AMCG00013648 | NA | coding | downstream | 221114 | 38467532 ~ 38468896 (+) |
| AMCG00013649 | NA | coding | downstream | 230549 | 38476967 ~ 38478698 (+) |
| G45860 | NA | non-coding | upstream | 2804 | 38238539 ~ 38243152 (+) |
| G45854 | NA | non-coding | upstream | 33070 | 38211090 ~ 38212886 (+) |
| G45812 | NA | non-coding | upstream | 147425 | 38097990 ~ 38098531 (+) |
| G45805 | NA | non-coding | upstream | 172104 | 38073255 ~ 38073852 (+) |
| G45737 | NA | non-coding | upstream | 313758 | 37876383 ~ 37932198 (+) |
| G45863 | NA | non-coding | downstream | 3609 | 38250027 ~ 38252663 (+) |
| G45865 | NA | non-coding | downstream | 107496 | 38353914 ~ 38354711 (+) |
| G45941 | NA | non-coding | downstream | 171147 | 38417565 ~ 38474315 (+) |
| G45951 | bckdha,LOC102788451 | non-coding | downstream | 223636 | 38470054 ~ 38472706 (+) |
| G45990 | NA | non-coding | downstream | 278294 | 38524712 ~ 38525412 (+) |
| G45850 | NA | other | upstream | 14626 | 38230566 ~ 38231330 (+) |
| AMCG00013629 | hnrnpl2,LOC105006371 | other | upstream | 176311 | 38054897 ~ 38069645 (+) |
| AMCG00013618 | NA | other | upstream | 424381 | 37818371 ~ 37821575 (+) |
| AMCG00013616 | ccdc9 | other | upstream | 428192 | 37805207 ~ 37817764 (+) |
| AMCG00013595 | NA | other | upstream | 918245 | 37315213 ~ 37327711 (+) |
| G45894 | NA | other | downstream | 124238 | 38370656 ~ 38373198 (+) |
| AMCG00013654 | NA | other | downstream | 318071 | 38564489 ~ 38566281 (+) |
| AMCG00013665 | NA | other | downstream | 398860 | 38645278 ~ 38673471 (+) |
| AMCG00013672 | h3f3b,H3F3A,LOC101073377,LOC105909691,LOC107388308,LOC107572204 | other | downstream | 410178 | 38656596 ~ 38707354 (+) |
| AMCG00013681 | NA | other | downstream | 565527 | 38811945 ~ 38821954 (+) |
