G46739


Basic Information

Item Value
gene id G46739
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 42703656 ~ 42792219 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU58277
tgtgtgtgtatatatatatatatatatatcacactcacctaaaggattattaggaacacctgttcaatttctcattaatgcaattatctaaccaaccaatcacatggcagttgcttcaatgcatttaggggtgtggtcctggtcaagacaatctcctgaactccaaactgaatgtctgaatgggaaagaaaggtgatttaagcaattttgag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU58277 True 212 lncRNA 0.36 2 42703656 42792219

Neighbor

gene id symbol gene type direction distance location
AMCG00013776 uhrf1bp1,LOC102796170 coding upstream 14453 42665282 ~ 42689203 (+)
AMCG00013774 pacsin1b coding upstream 134077 42555808 ~ 42569579 (+)
AMCG00013771 nudt3,LOC106566013 coding upstream 216292 42477671 ~ 42487364 (+)
AMCG00013761 NA coding upstream 916262 41764744 ~ 41787394 (+)
AMCG00013759 NA coding upstream 1066431 41621764 ~ 41637225 (+)
AMCG00013785 scube1,LOC107550129 coding downstream 50356 42842575 ~ 42866909 (+)
AMCG00013786 scube3,LOC106566910 coding downstream 101047 42893266 ~ 42936143 (+)
AMCG00013787 NA coding downstream 144782 42937001 ~ 42946339 (+)
AMCG00013791 adipor1 coding downstream 273117 43065336 ~ 43069921 (+)
AMCG00013799 NA coding downstream 311915 43104134 ~ 43108636 (+)
G46734 NA non-coding upstream 8033 42693662 ~ 42695623 (+)
G46730 NA non-coding upstream 11110 42692206 ~ 42692546 (+)
G46701 NA non-coding upstream 204057 42495746 ~ 42499599 (+)
G46652 NA non-coding upstream 810482 41845308 ~ 41893174 (+)
G46538 NA non-coding upstream 1290056 41413360 ~ 41413600 (+)
G46798 NA non-coding downstream 185393 42977612 ~ 42980239 (+)
G46814 NA non-coding downstream 206520 42998739 ~ 42999135 (+)
G46861 NA non-coding downstream 294171 43086390 ~ 43086600 (+)
G46905 NA non-coding downstream 558634 43350853 ~ 43352415 (+)
G46940 NA non-coding downstream 640157 43432376 ~ 43452015 (+)
AMCG00013777 NA other upstream 41812 42650190 ~ 42661844 (+)
G46723 cunh6orf106,zgc:101577,LOC107696455,LOC107579776,LOC107724532,LOC107595408 other upstream 54902 42644987 ~ 42648754 (+)
AMCG00013770 NA other upstream 257176 42428101 ~ 42446480 (+)
AMCG00013729 NA other upstream 2313715 40377732 ~ 40389941 (+)
G46345 NA other upstream 2329856 40350652 ~ 40373800 (+)
G46840 LOC107711852,LOC107679810,LOC107594520,LOC108425079,LOC108265838 other downstream 247765 43039984 ~ 43044436 (+)
G46862 NA other downstream 295070 43087289 ~ 43089643 (+)
G46945 NA other downstream 646273 43438492 ~ 43440698 (+)
AMCG00013838 si:ch211-240g9.1,LOC107598959,LOC107653411,LOC108264952,LOC108438565,LOC102786421,LOC100700110 other downstream 2242553 45034772 ~ 45095669 (+)
G47206 NA other downstream 2534439 45326658 ~ 45360882 (+)

Expression


Co-expression Network