G46862


Basic Information

Item Value
gene id G46862
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 43087289 ~ 43089643 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU58419
TAAGGGCAGCAACAGTTTATTCTTCAGCGTGGATCTCAGTGGTTGTGGCAGTTTCTGGAGCTGCTGTGTGGAAAAGCATACACTGCACTGAGACATCACAATACTACAATTTACAATTGCCATttgtcagtattttttttcttttttctaaatgaaattTGGAGTTACACAGTTCCCTGCCCCATCCTTTTAGGTTCAATAACCCATCCTAGTCCAGGAGAGCCATAGTGTGTTCCGGCCTTTGTTTCTTTCAAGTCCCTGTGAACTTCTTGTGAATGAATTCTTGTGCTTAAGTGGTCATCATTACCATTCGTTTGTAGATATTCCTCGATCGAGGACAGGGAGCCGCTTCTAAAATCTACTAGACTGTGGTTCTCCACAAACAAGCCTGGCCCTTTCTATGGCTACCACAATATCTGGCAACAAATTGATATACTTTCCAGGCCTTAGAAAGACAAGGATAATTAATGACAGAGGTGCACAGTTAGGTCACTGTGGGACAACACAATTAATATTCACTTTGAACTAACTAAGTATATTAACATACAATGTCGATCAAATAAAATGAGGATACACAGGTTGAGAGGAGGCAAGACTATAGTGtcataagaaaaacataatacaaataataacgtGGAAAGGCATGGAAATTTAACCTCAAATAACCGGAAACGTGATTCTCTTTACATTGGATATAGGGACATTTCACAGCCacttaatacacatttttctgGCGTTTGTTTCAGGCAACCCAACTTTGGTCTTAACAGTTAAAAAGGACGGAcgaatttcaaaatgttattcctCTCTTACGACTAAacgttttaattgaaaaagctAAATATTGGACATGCTGCCGGCAAATTAAAAgtttcaaatatgaaaatggctaaAAGGAGAAACTACACCGCAACTGCATTCAGACAAAAACAGTGATTTGAGTATACGCTACATATAAAAACCACAGTCATTACACTGTAGCCTTATTAAAACTAATAGAACACCACAAGTTATACATTTGGTAGATCTTAAAGCAATTtcttacagtacagtaatactTAGATTTTCTCCAAGTATAAATAGTGTTACAGCCATCTTAAAAAGGAAGCTTCCACTTATTAAACAAGATaaaaactttatataaaacacatgtatacaAAATTGCTTGCTTTGTACGAGTCTACACAGGATTTGATACATTACCGGAGATAAGGAGACTTATATTAGGGTTTATGGAGTAATTGGTTTGGtattatttaactttaaaaacagattaattaaaaaaaaaaaaaactactttttgaTGACAGTTGGTTGCCTGAAACAAacttagaaacaaaaaaataacagttgGTCCATTTTCTATTCAAATTAAGTTCTGGATTGGCCGTTTCACATAATCTAAAATTATGACACATTCAAACACCTAAATGGGgagaaaaagaatacaaatcaaCATTTTCAAGTCAGTCATGTCtatatttttgtcattaatctagtttaaaatgttttttttttttttgtcagttattaactaaaatatttttttttcttctactcagtAATACAGTTAACGGTGATACAATGAAACATACAAAGCGTTTCAATACCAAATTAAACGACTCTAAGGCTTAAAATtcgaagaaacaaaaaaggttaaaaacgacataaaaacaaaaagtggaaCTTGAACAGGAGCTTCCAGTTTCAACTTCCAGTCCTGTGTAGTCCCTGCAGTATCTGACACGAGTGGGGGCCAGGACGCAGCGCCCACAACACCCCCGTCGGGGCATGAAAGCAGCGAAGGACAGCCGTCTCCCGtcaccctcctcctccaggcCGTCACAGGTAGGGGAACTCATTGATTTTCCTGGGGCTGATGGGATAGCCGCCGTACACCGCGCCGGCCCGGGAGGTGGCGATGTAGGGCTGAGCAGAGAACTGGTGCTGGAATTGGGAGGTGGGCACAGTGGGCGCCCCGAGGAGGTTGTGCGCCATGCCCCCCGCCTTCCTGTGAAGCAGCCCCGAGGCGTGGGGGGGGAACGTGGCGCTGGCGTTCACCTGGTGAGAGCCGGGCTGTGGGGCTAGCAGCTGGGCCATGGCGGAGGAGGCCGAGGGAGCGTAGCTGTACAGGTGGGACAGCCCGGCGCTGTGCGGGGGTGCTTCCTGCAGGTAGTACTGCGCATGGGAGGAAACGGGCACATAGGCCTGCTGCCTGCGAGacaagctgctgctgctgctgctgctactgctgctccggctgctgcggctgctgctgcccccccaATCCTGGGAggaggacactgggggctgcaCCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU58419 True 2319 TUCP 0.43 2 43087289 43089643

Neighbor

gene id symbol gene type direction distance location
AMCG00013791 adipor1 coding upstream 17368 43065336 ~ 43069921 (+)
AMCG00013787 NA coding upstream 140950 42937001 ~ 42946339 (+)
AMCG00013786 scube3,LOC106566910 coding upstream 151146 42893266 ~ 42936143 (+)
AMCG00013785 scube1,LOC107550129 coding upstream 220380 42842575 ~ 42866909 (+)
AMCG00013783 anks1a,LOC102790859,LOC106572349 coding upstream 273146 42785427 ~ 42814143 (+)
AMCG00013799 NA coding downstream 14491 43104134 ~ 43108636 (+)
AMCG00013803 NA coding downstream 189488 43279131 ~ 43282004 (+)
AMCG00013807 NA coding downstream 336312 43425955 ~ 43431338 (+)
AMCG00013811 NA coding downstream 380814 43470457 ~ 43487228 (+)
AMCG00013812 NA coding downstream 401143 43490786 ~ 43514457 (+)
G46861 NA non-coding upstream 689 43086390 ~ 43086600 (+)
G46814 NA non-coding upstream 88154 42998739 ~ 42999135 (+)
G46798 NA non-coding upstream 107050 42977612 ~ 42980239 (+)
G46739 NA non-coding upstream 295070 42703656 ~ 42792219 (+)
G46734 NA non-coding upstream 391666 42693662 ~ 42695623 (+)
G46905 NA non-coding downstream 261210 43350853 ~ 43352415 (+)
G46940 NA non-coding downstream 342733 43432376 ~ 43452015 (+)
G46941 NA non-coding downstream 351854 43441497 ~ 43443296 (+)
G46949 NA non-coding downstream 373128 43462771 ~ 43464006 (+)
G47032 NA non-coding downstream 611281 43700924 ~ 43712011 (+)
G46840 LOC107711852,LOC107679810,LOC107594520,LOC108425079,LOC108265838 other upstream 42853 43039984 ~ 43044436 (+)
AMCG00013777 NA other upstream 425445 42650190 ~ 42661844 (+)
G46723 cunh6orf106,zgc:101577,LOC107696455,LOC107579776,LOC107724532,LOC107595408 other upstream 438535 42644987 ~ 42648754 (+)
AMCG00013770 NA other upstream 640809 42428101 ~ 42446480 (+)
AMCG00013729 NA other upstream 2697348 40377732 ~ 40389941 (+)
G46945 NA other downstream 348849 43438492 ~ 43440698 (+)
AMCG00013838 si:ch211-240g9.1,LOC107598959,LOC107653411,LOC108264952,LOC108438565,LOC102786421,LOC100700110 other downstream 1945129 45034772 ~ 45095669 (+)
G47206 NA other downstream 2237015 45326658 ~ 45360882 (+)
AMCG00013872 NA other downstream 2726729 45816372 ~ 45823228 (+)
G47398 NA other downstream 2845016 45934659 ~ 45941906 (+)

Expression


Co-expression Network