G46905


Basic Information

Item Value
gene id G46905
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 43350853 ~ 43352415 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU58474
CTGAATCTCTGCAGTTCCTTCTGTGACAGCTCGATCATGTGAAGCAGGTCACTGTGAAAGATTGAAGCAATGATAAACACAAGTAGGTGTATATACCAACAAGAGCAGTGGCTCCCAAACCCTGATCCCAGAGGATGCCTATATCTAGGCAGGTTtttttggaatttaaaatgtataaacttgGGGTCCCCGGGGCATCCGAGCTTGATAACAAATTACTTCATAGGcatataaataggaaaaataagcaatatggaaacaaaaataagtaaataaaaaacactaagctTACTCTAAACTTTTCCAATAGTGCCTCTCTGTTTTTTGggtctgtattttatgtggagctgaaatcaaacaaactcagttatactgcattattattatttattcattcacatagttattatgtattgatcatttgtataaactgaagtgaccttgtagagcccccagctgtttgcaatagCTTGTTTGCCTACTctttgcatttggctgattggcTGCATTTCTTGTAGGATGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU58474 True 525 lncRNA 0.37 2 43350853 43352415

Neighbor

gene id symbol gene type direction distance location
AMCG00013803 NA coding upstream 68849 43279131 ~ 43282004 (+)
AMCG00013799 NA coding upstream 242217 43104134 ~ 43108636 (+)
AMCG00013791 adipor1 coding upstream 280932 43065336 ~ 43069921 (+)
AMCG00013787 NA coding upstream 404514 42937001 ~ 42946339 (+)
AMCG00013786 scube3,LOC106566910 coding upstream 414710 42893266 ~ 42936143 (+)
AMCG00013807 NA coding downstream 73540 43425955 ~ 43431338 (+)
AMCG00013811 NA coding downstream 118042 43470457 ~ 43487228 (+)
AMCG00013812 NA coding downstream 138371 43490786 ~ 43514457 (+)
AMCG00013815 NA coding downstream 242026 43594441 ~ 43607562 (+)
AMCG00013817 NA coding downstream 265636 43618051 ~ 43620709 (+)
G46861 NA non-coding upstream 264253 43086390 ~ 43086600 (+)
G46814 NA non-coding upstream 351718 42998739 ~ 42999135 (+)
G46798 NA non-coding upstream 370614 42977612 ~ 42980239 (+)
G46739 NA non-coding upstream 558634 42703656 ~ 42792219 (+)
G46734 NA non-coding upstream 655230 42693662 ~ 42695623 (+)
G46940 NA non-coding downstream 79961 43432376 ~ 43452015 (+)
G46941 NA non-coding downstream 89082 43441497 ~ 43443296 (+)
G46949 NA non-coding downstream 110356 43462771 ~ 43464006 (+)
G47032 NA non-coding downstream 348509 43700924 ~ 43712011 (+)
G47040 NA non-coding downstream 567254 43919669 ~ 43919967 (+)
G46862 NA other upstream 261210 43087289 ~ 43089643 (+)
G46840 LOC107711852,LOC107679810,LOC107594520,LOC108425079,LOC108265838 other upstream 306417 43039984 ~ 43044436 (+)
AMCG00013777 NA other upstream 689009 42650190 ~ 42661844 (+)
G46723 cunh6orf106,zgc:101577,LOC107696455,LOC107579776,LOC107724532,LOC107595408 other upstream 702099 42644987 ~ 42648754 (+)
AMCG00013770 NA other upstream 904373 42428101 ~ 42446480 (+)
G46945 NA other downstream 86077 43438492 ~ 43440698 (+)
AMCG00013838 si:ch211-240g9.1,LOC107598959,LOC107653411,LOC108264952,LOC108438565,LOC102786421,LOC100700110 other downstream 1682357 45034772 ~ 45095669 (+)
G47206 NA other downstream 1974243 45326658 ~ 45360882 (+)
AMCG00013872 NA other downstream 2463957 45816372 ~ 45823228 (+)
G47398 NA other downstream 2582244 45934659 ~ 45941906 (+)

Expression


Co-expression Network