G46949



Basic Information


Item Value
gene id G46949
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 43462771 ~ 43464006 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU58532
CTTGTCTGGCAGGGCATTGCCCACCTCCCTCATGCTGTGCACACGTTGGCTCAGGGTGCCCGACTGCTCGATCAGGGACTCGGCCGCCGTGTCATGCTCCTTCAGCCGCTCCAGCAGAGTGCGAGCATCGCTCAGGACCTTCTCCAGTGTGCACGTCATGACCGTCAGACCGGGCTGTAGTTGAGTCTTTTCCGCGGTCGCTGCCGTGTCAACCCCTCGGCtcttctctttcc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU58532 True 233 lncRNA 0.62 2 43462771 43464006
Loading

Neighbor


gene id symbol gene type direction distance location
AMCG00013807 NA coding upstream 31433 43425955 ~ 43431338 (+)
AMCG00013803 NA coding upstream 180767 43279131 ~ 43282004 (+)
AMCG00013799 NA coding upstream 354135 43104134 ~ 43108636 (+)
AMCG00013791 adipor1 coding upstream 392850 43065336 ~ 43069921 (+)
AMCG00013787 NA coding upstream 516432 42937001 ~ 42946339 (+)
AMCG00013811 NA coding downstream 6451 43470457 ~ 43487228 (+)
AMCG00013812 NA coding downstream 26780 43490786 ~ 43514457 (+)
AMCG00013815 NA coding downstream 130435 43594441 ~ 43607562 (+)
AMCG00013817 NA coding downstream 154045 43618051 ~ 43620709 (+)
AMCG00013821 NA coding downstream 166462 43630468 ~ 43631598 (+)
G46940 NA non-coding upstream 10756 43432376 ~ 43452015 (+)
G46941 NA non-coding upstream 19475 43441497 ~ 43443296 (+)
G46905 NA non-coding upstream 110356 43350853 ~ 43352415 (+)
G46861 NA non-coding upstream 376171 43086390 ~ 43086600 (+)
G46814 NA non-coding upstream 463636 42998739 ~ 42999135 (+)
G47032 NA non-coding downstream 236918 43700924 ~ 43712011 (+)
G47040 NA non-coding downstream 455663 43919669 ~ 43919967 (+)
G47080 NA non-coding downstream 758402 44222408 ~ 44223401 (+)
G47106 NA non-coding downstream 825051 44289057 ~ 44291796 (+)
G47107 NA non-coding downstream 834263 44298269 ~ 44298664 (+)
G46945 NA other upstream 22073 43438492 ~ 43440698 (+)
G46862 NA other upstream 373128 43087289 ~ 43089643 (+)
G46840 LOC107711852,LOC107679810,LOC107594520,LOC108425079,LOC108265838 other upstream 418335 43039984 ~ 43044436 (+)
AMCG00013777 NA other upstream 800927 42650190 ~ 42661844 (+)
G46723 cunh6orf106,zgc:101577,LOC107696455,LOC107579776,LOC107724532,LOC107595408 other upstream 814017 42644987 ~ 42648754 (+)
AMCG00013838 si:ch211-240g9.1,LOC107598959,LOC107653411,LOC108264952,LOC108438565,LOC102786421,LOC100700110 other downstream 1570766 45034772 ~ 45095669 (+)
G47206 NA other downstream 1862652 45326658 ~ 45360882 (+)
AMCG00013872 NA other downstream 2352366 45816372 ~ 45823228 (+)
G47398 NA other downstream 2470653 45934659 ~ 45941906 (+)
AMCG00013879 dennd2d other downstream 2479565 45943571 ~ 45959194 (+)

Expression


G46949 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 3.
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G46949 Expression in each Bioproject

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G46949 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 20.
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Co-expression Network